| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 200 | = 4567 | 0 (0.000) | 45 (0.060) +GGTGATGCTGCCAACT |
40/168 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 223 | = 698 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 200/4467‑4567 | tCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGAc > 1:1061931/1‑101 (MQ=255) cACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACg > 2:1373384‑M1/1‑100 (MQ=255) cACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACg < 1:774667‑M1/101‑2 (MQ=255) cccGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggt > 2:400496‑M1/1‑98 (MQ=255) cccGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggt > 2:590725‑M1/1‑98 (MQ=255) ccGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtg > 2:841501‑M1/1‑97 (MQ=255) cGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACgggga < 2:1002359‑M1/101‑6 (MQ=255) gTGATTGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgat < 1:1527025‑M1/101‑7 (MQ=255) cgatctgtattccTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgat < 2:973007‑M1/95‑7 (MQ=255) gATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgc > 1:1386117‑M1/1‑93 (MQ=255) gTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatagatcg > 1:973012‑M1/1‑89 (MQ=255) tGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttac > 2:795513‑M1/1‑82 (MQ=255) aCCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactga > 1:792064‑M1/1‑79 (MQ=255) aCCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactga < 2:1647616‑M1/101‑23 (MQ=255) aCCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactga > 2:774366‑M1/1‑79 (MQ=255) aTCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgt < 1:575100‑M1/101‑31 (MQ=255) tCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgta < 1:721295‑M1/101‑32 (MQ=255) cTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtat > 1:1225815‑M1/1‑69 (MQ=255) gACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgat < 1:73619‑M1/101‑36 (MQ=255) cATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtt < 1:929841‑M1/101‑42 (MQ=255) atatCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgttt > 1:866831‑M1/1‑59 (MQ=255) atatCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgttt > 2:1601432‑M1/1‑59 (MQ=255) atCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgttttt > 2:1254936‑M1/1‑57 (MQ=255) atCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgttttt < 2:39042‑M1/101‑45 (MQ=255) gggTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag > 1:308687‑M1/1‑54 (MQ=255) ggTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 1:590730‑M1/101‑49 (MQ=255) ggTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 2:1302717‑M1/101‑49 (MQ=255) aTGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc > 1:1537719‑M1/1‑48 (MQ=255) tGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc > 1:1072311‑M1/1‑47 (MQ=255) gAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca > 2:229025‑M1/1‑46 (MQ=255) gAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca > 2:422093‑M1/1‑46 (MQ=255) aGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag < 1:1069607‑M1/101‑57 (MQ=255) gTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt > 1:183935‑M1/1‑44 (MQ=255) aTTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgg < 2:1225810‑M1/101‑60 (MQ=255) cGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct < 1:1528717‑M1/101‑65 (MQ=255) gTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg > 1:612464‑M1/1‑36 (MQ=255) gggCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt < 2:86362‑M1/101‑68 (MQ=255) ggCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt > 1:429694‑M1/1‑33 (MQ=255) gCGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc < 1:924661‑M1/101‑70 (MQ=255) cGATAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct < 2:751238‑M1/101‑71 (MQ=255) aTAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat > 2:989345‑M1/1‑29 (MQ=255) tAAACAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc < 1:1373390‑M1/101‑74 (MQ=255) aaaCAACGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca > 2:1600525‑M1/1‑27 (MQ=255) aacGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg > 2:143491‑M1/1‑23 (MQ=255) acGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt < 2:1601856‑M1/101‑80 (MQ=255) cGTTTCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc > 2:647513‑M1/1‑21 (MQ=255) tttCTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtgcc > 2:686738‑M1/1‑19 (MQ=255) cTTGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc > 2:1268343‑M1/1‑16 (MQ=255) ttGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct < 1:1630756‑M1/101‑87 (MQ=255) tGCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg > 1:625487‑M1/1‑14 (MQ=255) gCCTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgt < 1:229025‑M1/101‑89 (MQ=255) cTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc > 2:1509213‑M1/1‑11 (MQ=255) cTCAAGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc > 2:635557‑M1/1‑11 (MQ=255) aaGGCGACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc > 2:875710‑M1/1‑8 (MQ=255) aGGCGACggtgatgctgccaacttactgatttagtgtatgatggggtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagct > 2:794513‑M1/1‑7 (MQ=255) gACggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg < 2:773527‑M1/101‑99 (MQ=255) | TCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 200/4467‑4567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |