New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 197 = 51700 (0.000)61 (1.150)
+GTAGGCCGGATAAGGCGCT
51/162 0.0 100% intergenic (–/–) –/– –/–
?55 = 27005 0 (0.000)intergenic (–/–) –/– –/–

AAGAAAGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  197/5070‑5170
                                                                                                    |                                                                                                 
aaGAAAGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCttt                                                                                                   >  1:411251/1‑101 (MQ=255)
    aaGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtag                                                                                               <  2:1146378‑M1/101‑5 (MQ=255)
     aGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtagg                                                                                              <  2:653424‑M1/101‑6 (MQ=255)
      ggCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggc                                                                                             >  2:313796‑M1/1‑95 (MQ=255)
        cGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccg                                                                                           >  1:278284‑M1/1‑93 (MQ=255)
          aGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccgga                                                                                         <  1:960637‑M1/101‑11 (MQ=255)
           gTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggat                                                                                        <  1:1388538‑M1/101‑12 (MQ=255)
           gTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggat                                                                                        >  1:1084821‑M1/1‑90 (MQ=255)
             ttGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataa                                                                                      <  1:1150486‑M1/101‑14 (MQ=255)
             ttGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataa                                                                                      >  2:332229‑M1/1‑88 (MQ=255)
              tGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataag                                                                                     <  1:1231521‑M1/101‑15 (MQ=255)
               gAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataagg                                                                                    <  2:895874‑M1/101‑16 (MQ=255)
                aGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggc                                                                                   >  2:483423‑M1/1‑85 (MQ=255)
                aGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggc                                                                                   <  1:1588988‑M1/101‑17 (MQ=255)
                     cTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcg                                                                              >  1:435924‑M1/1‑80 (MQ=255)
                      tGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgc                                                                             >  1:1428285‑M1/1‑79 (MQ=255)
                      tGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgc                                                                             <  1:1316329‑M1/101‑23 (MQ=255)
                       gTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcg                                                                            >  2:430744‑M1/1‑78 (MQ=255)
                       gTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcg                                                                            >  2:658944‑M1/1‑78 (MQ=255)
                            gCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgca                                                                       <  2:79005‑M1/101‑29 (MQ=255)
                              ttttGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatc                                                                     >  2:771007‑M1/1‑71 (MQ=255)
                              ttttGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatc                                                                     >  1:929709‑M1/1‑71 (MQ=255)
                               tttGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatcc                                                                    >  2:531944‑M1/1‑70 (MQ=255)
                                  gTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggcctgataaggcgcccgggccgcatccggc                                                                 <  2:1341906‑M1/101‑35 (MQ=255)
                                   tAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgacccgcatccggca                                                                >  2:1667334‑M1/1‑66 (MQ=255)
                                    aaGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcag                                                               >  1:220201‑M1/1‑65 (MQ=255)
                                         cgcgACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaac                                                          <  1:738894‑M1/101‑42 (MQ=255)
                                          gcgACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacg                                                         >  1:614446‑M1/1‑59 (MQ=255)
                                          gcgACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacg                                                         <  1:212882‑M1/101‑43 (MQ=255)
                                            gACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgcc                                                       >  1:1429013‑M1/1‑57 (MQ=255)
                                             aCGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccg                                                      <  1:1011682‑M1/101‑46 (MQ=255)
                                                tttGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggac                                                   >  2:61836‑M1/1‑53 (MQ=255)
                                                  tGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccg                                                 >  2:355114‑M1/1‑51 (MQ=255)
                                                   gcgcCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccga                                                >  1:999787‑M1/1‑50 (MQ=255)
                                                    cgcCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaa                                               >  2:707637‑M1/1‑49 (MQ=255)
                                                     gcCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCTTTTgtaggcgggataaggctctcgccccgcctccggcaggaaacgccggaccgaat                                              <  2:1294802‑M1/101‑54 (MQ=255)
                                                     gcCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaat                                              >  1:1217690‑M1/1‑48 (MQ=255)
                                                      cccTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaata                                             >  1:1308053‑M1/1‑47 (MQ=255)
                                                       ccTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatat                                            <  1:1705224‑M1/101‑56 (MQ=255)
                                                       ccTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatat                                            <  2:1053305‑M1/101‑56 (MQ=255)
                                                          ttGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcc                                         >  1:289627‑M1/1‑43 (MQ=255)
                                                           tGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcct                                        >  1:904126‑M1/1‑42 (MQ=255)
                                                           tGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcct                                        >  2:800823‑M1/1‑42 (MQ=255)
                                                           tGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcct                                        >  1:1340235‑M1/1‑42 (MQ=255)
                                                           tGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcct                                        <  2:1341344‑M1/101‑60 (MQ=255)
                                                            tcctGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctc                                       <  1:410816‑M1/100‑61 (MQ=255)
                                                             ccTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctct                                      >  1:655047‑M1/1‑40 (MQ=255)
                                                                gATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaa                                   >  2:132114‑M1/1‑37 (MQ=255)
                                                                gATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaa                                   <  1:1616735‑M1/101‑65 (MQ=255)
                                                                gATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaa                                   <  2:352028‑M1/101‑65 (MQ=255)
                                                                gATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaa                                   <  2:278284‑M1/101‑65 (MQ=255)
                                                                 aTGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaag                                  >  2:994518‑M1/1‑36 (MQ=255)
                                                                 aTGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaag                                  >  2:1282078‑M1/1‑36 (MQ=255)
                                                                  tGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagt                                 >  2:534692‑M1/1‑35 (MQ=255)
                                                                    ttCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtat                               >  2:821462‑M1/1‑33 (MQ=255)
                                                                     tCATATTTTAACTTGCTGATTTTTCGCCCTTTggaggccggataaggcgctcgccccccatcgggcaggaaacgccggaccgaatatgcctcttaagtatt                              <  1:326996‑M1/101‑70 (MQ=255)
                                                                     tCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatt                              >  2:374451‑M1/1‑32 (MQ=255)
                                                                      cATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtattt                             >  1:358816‑M1/1‑31 (MQ=255)
                                                                        tatCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttat                           >  2:1052678‑M1/1‑29 (MQ=255)
                                                                         atCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatc                          <  1:719823‑M1/101‑74 (MQ=255)
                                                                          tCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatct                         >  2:701807‑M1/1‑27 (MQ=255)
                                                                                cTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattct                   >  2:622693‑M1/1‑21 (MQ=255)
                                                                                 ttGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcacccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctg                  <  2:1492704‑M1/101‑82 (MQ=255)
                                                                                   gCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgca                >  1:822244‑M1/1‑18 (MQ=255)
                                                                                     tGATTTTTCGCCCTTTgtaggcgggatagggcgctcgcgccgcacccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaac              <  2:857226‑M1/101‑86 (MQ=255)
                                                                                       aaTTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccaaatatgcctcttaagtatttatctgattctgcaactg            <  2:213221‑M1/101‑88 (MQ=255)
                                                                                        aTTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactga           >  1:692495‑M1/1‑13 (MQ=255)
                                                                                             cGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatcct      >  1:1365429‑M1/1‑8 (MQ=255)
                                                                                              gCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatcctt     <  1:1622341‑M1/101‑95 (MQ=255)
                                                                                              gCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatcctt     >  1:217283‑M1/1‑7 (MQ=255)
                                                                                               ccttttgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttc    <  2:636288‑M1/98‑96 (MQ=255)
                                                                                               cccTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttc    <  2:497999‑M1/101‑96 (MQ=255)
                                                                                                cccttgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttcc   >  1:1428066‑M1/4‑5 (MQ=255)
                                                                                                ccTTTgtaggccggataaggcgctcgcgccgcacccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttcc   <  1:652700‑M1/101‑97 (MQ=255)
                                                                                                 cTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttccg  >  2:1177845‑M1/1‑4 (MQ=255)
                                                                                                    |                                                                                                 
AAGAAAGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  197/5070‑5170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.