| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 196 | = 5276 | 0 (0.000) | 47 (0.850) | 41/198 | 0.3 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 74 | 2 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 196/5174‑5276 | cggCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCGGGCTCCGGGTGCCGGATGCAGCGTGAACGCCt > 1:774190/3‑101 (MQ=2)cggCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGGGAACGCCt > 2:1490262/3‑101 (MQ=2) ggCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCtt < 2:1296606/100‑2 (MQ=2) gTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTta > 1:702348‑M1/1‑99 (MQ=255) tAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtat < 1:610375‑M1/101‑4 (MQ=255) tAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtat < 2:256413‑M1/101‑4 (MQ=255) aaCGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatcc < 2:352614‑M1/101‑6 (MQ=255) cTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcct < 2:253152‑M1/101‑11 (MQ=255) tGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtccta < 1:1490150‑M1/101‑12 (MQ=255) tGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtccta < 2:1570229‑M1/101‑12 (MQ=255) aTCCGTCCAACGGTTCGGATTTTGTAGGCCTGTTAAGACGCGGTAGCGGCGCATCAGGCGTCTGTTGGCGGATGCGGCGTAAACCCCTtctccgtcctaag > 1:5474‑M1/1‑88 (MQ=255) aTCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacg < 2:452600‑M1/101‑14 (MQ=255) tCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaatta < 2:898383‑M1/101‑19 (MQ=255) ccAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCTCATCAGGCATCTGTTGCCGCGTGCGGCGTAAACGCTTtatccgttctacgaattac < 2:838645‑M1/101‑20 (MQ=255) aCGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCCCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattactta < 1:1649659‑M1/101‑23 (MQ=255) gTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataa < 1:1526331‑M1/101‑26 (MQ=255) cGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCAGGATGCGGCGTAAACGCCTtatccgtcctaccaattacttataaatt < 2:263644‑M1/101‑29 (MQ=255) gATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattac < 2:550102‑M1/101‑31 (MQ=255) aTTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattacc < 1:1018177‑M1/101‑32 (MQ=255) aTTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattacc > 1:1372755‑M1/1‑70 (MQ=255) aTTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattacc > 2:1220986‑M1/1‑70 (MQ=255) tttGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgc < 1:379467‑M1/101‑34 (MQ=255) tGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcag < 1:747109‑M1/101‑36 (MQ=255) gTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagt > 2:486260‑M1/1‑65 (MQ=255) gTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagt > 1:124782‑M1/1‑65 (MQ=255) ggCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtacc < 1:1608681‑M1/101‑40 (MQ=255) gCCTGATAAGGCGCGGTAGCGTCGCATCAGTCATCGGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctccgaattacttataaatgaccgcagtaccg < 2:406073‑M1/101‑41 (MQ=255) tGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgctt > 1:743143‑M1/1‑58 (MQ=255) gATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgctta > 2:887079‑M1/1‑57 (MQ=255) aTAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaa < 1:631117‑M1/101‑46 (MQ=255) aTAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaa > 2:395481‑M1/1‑56 (MQ=255) aCGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttat < 1:1464988‑M1/101‑51 (MQ=255) cgcgGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttatt < 2:1498602‑M1/101‑52 (MQ=255) gcgGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattg < 1:1369851‑M1/101‑53 (MQ=255) ggTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgtt < 2:82774‑M1/101‑55 (MQ=255) ggTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgtt < 1:1350001‑M1/101‑55 (MQ=255) gTCGCATCAGGCATCTGTTGGCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggt > 2:1058531‑M1/1‑41 (MQ=255) gCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggc > 1:218980‑M1/1‑38 (MQ=255) cATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcg > 2:601627‑M1/1‑37 (MQ=255) cTGTTGCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgc > 1:1136374‑M1/1‑27 (MQ=255) gCCGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtat > 2:673670‑M1/1‑22 (MQ=255) ccGGATGCGGCGTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtatc > 1:716249‑M1/1‑21 (MQ=255) tGCGGCGTAAACGCCTtatccggcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtatccactg > 1:168420‑M1/1‑16 (MQ=255) cggcgTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtatccactggc > 2:694319‑M1/1‑14 (MQ=255) gTAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtatccactggcaccg > 2:881911‑M1/1‑10 (MQ=255) tAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtatccactggcaccgg > 1:664988‑M1/1‑9 (MQ=255) tAAACGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtatccactggcaccgg > 2:1055219‑M1/1‑9 (MQ=255) aaaCGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtatccactggcaccggc > 1:1047762‑M1/1‑8 (MQ=255) aaCGCCTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtatccactggcaccggct > 2:1178109‑M1/1‑7 (MQ=255) ccTtatccgtcctacgaattacttataaattaccgcagtaccgcttaatttattgttgttggtggcggaagtgatgctgtatccactggcaccggctgccg > 1:382855‑M1/1‑3 (MQ=255) | TAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 196/5174‑5276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |