| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 188 | = 6383 | 0 (0.000) | 50 (0.970) | 47/200 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 207 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTGCCTTTGTAACGCACTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 188/6283‑6383 | gTGCCTTTGTAACGCACTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTc < 2:439921/101‑1 (MQ=255)gTGCCTTTGTAACGCACTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTc < 1:151654/101‑1 (MQ=255) tGCCTTTGTAACGCACTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCa > 2:1252615‑M1/1‑100 (MQ=255) tGCCTTTGTAACGCACTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCa < 1:786808‑M1/101‑2 (MQ=255) ccTTTGTAACGCACTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagc > 2:353651‑M1/1‑98 (MQ=255) cGCACTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccgg < 2:1525007‑M1/101‑13 (MQ=255) cACTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggta > 2:1256310‑M1/1‑87 (MQ=255) aCTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtac > 2:338053‑M1/1‑86 (MQ=255) cTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacg > 1:1111065‑M1/1‑85 (MQ=255) cTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacg > 1:91332‑M1/1‑85 (MQ=255) ttCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgt > 1:307665‑M1/1‑84 (MQ=255) tCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTCATACCAGTCagcagattccggtacgtc < 2:1630259‑M1/101‑19 (MQ=255) cAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtca > 2:1544563‑M1/1‑82 (MQ=255) aGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcag > 2:766722‑M1/1‑81 (MQ=255) gTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagt > 1:1322444‑M1/1‑80 (MQ=255) tAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtt < 2:1087525‑M1/101‑23 (MQ=255) aaaGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagttt < 1:102289‑M1/101‑24 (MQ=255) aaaGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagttt < 1:696174‑M1/101‑24 (MQ=255) aagaagTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttg > 2:1665014‑M1/1‑77 (MQ=255) agaagTGAGCATCCGGGGTACGCGTCTGCGGCGCGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgc < 2:403282‑M1/101‑26 (MQ=255) agaagTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgc > 2:954836‑M1/1‑76 (MQ=255) agTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcg < 2:761381‑M1/101‑29 (MQ=255) tGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgcc > 1:130893‑M1/1‑71 (MQ=255) cGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggttt > 2:881058‑M1/1‑63 (MQ=255) gggTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgc > 1:578457‑M1/1‑61 (MQ=255) gggTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgc < 1:1283867‑M1/101‑41 (MQ=255) tcgcatCTGCGTCACTTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggag < 2:842817‑M1/100‑45 (MQ=255) gTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgc > 1:1345469‑M1/1‑53 (MQ=255) cTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcag < 1:583457‑M1/101‑51 (MQ=255) cTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcag > 1:187090‑M1/1‑51 (MQ=255) tGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcagg < 2:877425‑M1/101‑52 (MQ=255) ggCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggagg > 2:1126134‑M1/1‑47 (MQ=255) cGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcagg < 1:1197733‑M1/101‑59 (MQ=255) cGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcagg < 2:611330‑M1/101‑59 (MQ=255) gTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggt < 1:348851‑M1/101‑60 (MQ=255) aaCCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcag < 1:1296466‑M1/101‑65 (MQ=255) cccAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtac > 2:696773‑M1/1‑34 (MQ=255) ccAGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtacc < 1:1437547‑M1/101‑69 (MQ=255) aGGCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccag > 1:1605107‑M1/1‑31 (MQ=255) gCGATGATGTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtc < 1:766727‑M1/101‑73 (MQ=255) atgatgTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgta > 2:566204‑M1/1‑26 (MQ=255) gatgTAGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtaga > 1:316467‑M1/1‑24 (MQ=255) aGCTGGAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtagaagctt < 1:1215200‑M1/101‑83 (MQ=255) ggAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtagaagcttaagc > 1:473862‑M1/1‑15 (MQ=255) ggAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtagaagcttaagc < 2:1345463‑M1/101‑87 (MQ=255) gAGTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtagaagcttaagca > 1:1305499‑M1/1‑14 (MQ=255) gTTATACCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtagaagcttaagcaag < 2:502426‑M1/101‑90 (MQ=255) taCCAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtagaagcttaagcaagtacc > 1:1682525‑M1/1‑8 (MQ=255) ccAGTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtagaagcttaagcaagtaccgc > 2:1615000‑M1/1‑6 (MQ=255) gTCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtagaagcttaagcaagtaccgccaa > 2:128128‑M1/1‑3 (MQ=255) tCagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggtcgcagtaccagtcgtagaagcttaagcaagtaccgccaat < 1:241910‑M1/101‑100 (MQ=255) cagcagattccggtacgtcagtttgctcgccccaggtttgcggagacgcaggaggcaggaagcagtaccagtcgtagaagcttaagcaagtaccgccaatc > 2:1428536‑M1/1‑1 (MQ=255) | GTGCCTTTGTAACGCACTTCAGTAAAGAAGTGAGCATCCGGGGTACGCGTCTGCGGCACGTTTGAACCCCAGGCGATGATGTAGCTGGAGTTATACCAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 188/6283‑6383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |