New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 184 | = 6777 | 0 (0.000) | 17 (0.310) | 10/192 | 3.0 | 34.3% | intergenic (–/–) | –/– | –/– |
? | 51 | 10563 = | 65 (1.510) | intergenic (–/–) | –/– | –/– |
CAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 184/6680‑6777 | cAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaa < 2:550825‑M1/101‑4 (MQ=255) aGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaa < 1:602701‑M1/101‑5 (MQ=255) ttccgatcttgatgattttgcccaGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaac < 1:721128‑M1/92‑6 (MQ=255) gAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaac < 1:1072856‑M1/101‑6 (MQ=255) gAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaac < 1:985091‑M1/101‑6 (MQ=255) aaaGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacg > 2:562259‑M1/1‑95 (MQ=255) aGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgcc < 1:282242‑M1/101‑9 (MQ=255) gggAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgcct > 1:1282921‑M1/1‑92 (MQ=255) aGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttat > 1:1082707‑M1/1‑89 (MQ=255) gTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatc < 2:1512116‑M1/101‑14 (MQ=255) tgatgaTTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacagatcggaa > 2:721123‑M1/1‑87 (MQ=255) tttGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctac < 1:1196726‑M1/101‑22 (MQ=255) gCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctacggg < 2:605983‑M1/101‑25 (MQ=255) ctcagACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctacgggg < 1:1144316‑M1/99‑26 (MQ=255) cccAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctacgggg > 1:1594470‑M1/1‑76 (MQ=255) ccAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCGCGGTTGCCGGATGCGGCGtaaacgccttatccggcctacgggga < 1:822372‑M1/101‑27 (MQ=255) cAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctacggggag < 1:1119135‑M1/101‑28 (MQ=255) gcgtaaacgccttatccagcctaccgccgcgatctgtaggccggataagacgagtcaagcgtcgcatccggcaaatagagcctggctgataattactgatt > 1:1047584‑M1/1‑3 (MQ=255) gtaaacgccttatcccgcctaccgccgcgatctgtaggccggataagacgcgtcaagcgtcgcatccggcaaatagcgcctggctgataattactgattac > 2:1356789‑M1/1‑1 (MQ=255) gtaaacgccttatccagcctaccgccgcgatctgtaggccggataagacgcgtcaagcgtcgcatccggcaaatagcgcctggctgataattactgattac < 1:491402‑M1/101‑101 (MQ=255) | CAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 184/6680‑6777 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |