New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 184 = 67770 (0.000)17 (0.310) 10/192 3.0 34.3% intergenic (–/–) –/– –/–
?51 10563 = 65 (1.510)intergenic (–/–) –/– –/–

CAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  184/6680‑6777
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cAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaa                                                                                                   <  2:550825‑M1/101‑4 (MQ=255)
 aGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaa                                                                                                  <  1:602701‑M1/101‑5 (MQ=255)
  ttccgatcttgatgattttgcccaGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaac                                                                                                 <  1:721128‑M1/92‑6 (MQ=255)
  gAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaac                                                                                                 <  1:1072856‑M1/101‑6 (MQ=255)
  gAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaac                                                                                                 <  1:985091‑M1/101‑6 (MQ=255)
   aaaGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacg                                                                                                >  2:562259‑M1/1‑95 (MQ=255)
     aGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgcc                                                                                              <  1:282242‑M1/101‑9 (MQ=255)
      gggAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgcct                                                                                             >  1:1282921‑M1/1‑92 (MQ=255)
         aGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttat                                                                                          >  1:1082707‑M1/1‑89 (MQ=255)
          gTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatc                                                                                         <  2:1512116‑M1/101‑14 (MQ=255)
           tgatgaTTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacagatcggaa                                                                                        >  2:721123‑M1/1‑87 (MQ=255)
                  tttGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctac                                                                                 <  1:1196726‑M1/101‑22 (MQ=255)
                     gCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctacggg                                                                              <  2:605983‑M1/101‑25 (MQ=255)
                      ctcagACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctacgggg                                                                             <  1:1144316‑M1/99‑26 (MQ=255)
                      cccAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctacgggg                                                                             >  1:1594470‑M1/1‑76 (MQ=255)
                       ccAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCGCGGTTGCCGGATGCGGCGtaaacgccttatccggcctacgggga                                                                            <  1:822372‑M1/101‑27 (MQ=255)
                        cAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCGtaaacgccttatccggcctacggggag                                                                           <  1:1119135‑M1/101‑28 (MQ=255)
                                                                                               gcgtaaacgccttatccagcctaccgccgcgatctgtaggccggataagacgagtcaagcgtcgcatccggcaaatagagcctggctgataattactgatt    >  1:1047584‑M1/1‑3 (MQ=255)
                                                                                                 gtaaacgccttatcccgcctaccgccgcgatctgtaggccggataagacgcgtcaagcgtcgcatccggcaaatagcgcctggctgataattactgattac  >  2:1356789‑M1/1‑1 (MQ=255)
                                                                                                 gtaaacgccttatccagcctaccgccgcgatctgtaggccggataagacgcgtcaagcgtcgcatccggcaaatagcgcctggctgataattactgattac  <  1:491402‑M1/101‑101 (MQ=255)
                                                                                                 |                                                                                                    
CAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAATCACTGTCTAGTCGGCACGGTTGCCGGATGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  184/6680‑6777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.