New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	184	1 =	0 (0.000)	24 (0.440) +TGCCGGATGCG	19/178	2.0	50.4%	intergenic (–/–)	–/–	–/–
	?	196	5176 =	53 (1.010)					intergenic (–/–)	–/–	–/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTCACGGGTGTTCT  >  184/1‑100                                                                                 |                                                                                                    cctgatgcgacgctggcgcgtcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACAt                                                                                 >  2:1112380‑M1/81‑101 (MQ=255)  ctgatgcgacgctggcgcgtcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATg                                                                                <  1:1022970‑M1/22‑1 (MQ=255)            gctggggcgtcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTc                                                                      >  2:321668‑M1/70‑101 (MQ=255)             ctggcgcgtcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCg                                                                     >  1:463790‑M1/69‑101 (MQ=255)              tggcgcgtcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGc                                                                    <  2:1016817‑M1/34‑1 (MQ=255)                gcgcgtcttatcaggcctacaacccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAg                                                                  >  1:1578099‑M1/66‑101 (MQ=255)                 cgcgtcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGc                                                                 <  2:878625‑M1/37‑1 (MQ=255)                  gcgtcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGcc                                                                <  1:242082‑M1/38‑1 (MQ=255)                   cgtcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCa                                                               <  1:326842‑M1/39‑1 (MQ=255)                   cgtcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCa                                                               >  1:83079‑M1/63‑101 (MQ=255)                     tcttatcaggcctacaaaccgagccgtaggccggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATc                                                             <  1:1346407‑M1/41‑1 (MQ=255)                                                    cggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTtgt                              >  2:1520219‑M1/30‑101 (MQ=255)                                                    cggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTtgt                              <  1:123333‑M1/72‑1 (MQ=255)                                                     ggataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTtgtg                             >  1:1697599‑M1/29‑101 (MQ=255)                                                      gataaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGc                            <  2:564314‑M1/74‑1 (MQ=255)                                                         aaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTc                         <  2:1334790‑M1/77‑1 (MQ=255)                                                         aaggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTc                         <  1:995995‑M1/77‑1 (MQ=255)                                                          aggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCt                        >  2:230115‑M1/24‑101 (MQ=255)                                                           ggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCtt                       >  1:1016822‑M1/23‑101 (MQ=255)                                                           ggcgtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCtt                       >  2:1480775‑M1/23‑101 (MQ=255)                                                              gtttacgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAg                    >  2:731411‑M1/20‑101 (MQ=255)                                                                   cgccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCg               <  2:1485510‑M1/87‑1 (MQ=255)                                                                     ccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTc             <  2:124747‑M1/89‑1 (MQ=255)                                                                     ccgcatccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTc             >  1:312621‑M1/13‑101 (MQ=255)                                                                           ccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTCACGGgt       >  2:297703‑M1/7‑101 (MQ=255)                                                                           ccggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTCACGGgt       >  1:492080‑M1/7‑101 (MQ=255)                                                                             ggcaTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTCACGGgtgt     >  2:1404614‑M1/5‑101 (MQ=255)                                                                                aTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTCACGGGTGTTCt  >  2:606021‑M1/2‑101 (MQ=255)                                                                                aTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTCACGGGTGTTCt  >  2:1346401‑M1/2‑101 (MQ=255)                                                                                aTCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTCACGGGTGTTCt  >  2:242082‑M1/2‑101 (MQ=255)                                                                                 |                                                                                                    ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCTTGTGCGTCTTCAGCGCCGTCACGGGTGTTCT  >  184/1‑100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.