| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 183 | = 6872 | 0 (0.000) | 62 (0.310) | 48/200 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 188 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 183/6772‑6872 | aaTGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTcc < 1:1681282/101‑1 (MQ=255)aaTGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTcc < 1:1244392/101‑1 (MQ=255) aTGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCg > 1:619346‑M1/1‑100 (MQ=255) cgcgcTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtg < 1:487313‑M1/101‑5 (MQ=255) cgcgcTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtg < 2:1618190‑M1/101‑5 (MQ=255) gcgcTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtgg < 1:1073154‑M1/101‑6 (MQ=255) gcTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtgggg < 2:292141‑M1/101‑8 (MQ=255) cTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggg > 2:1384616‑M1/1‑93 (MQ=255) cTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcc < 2:1158379‑M1/101‑12 (MQ=255) tGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccg < 2:143577‑M1/101‑14 (MQ=255) tGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagc < 2:217777‑M1/101‑17 (MQ=255) ttAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaa < 2:1430148‑M1/101‑24 (MQ=255) ttAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaa < 2:535644‑M1/101‑24 (MQ=255) tAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaag < 2:354713‑M1/101‑25 (MQ=255) tAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaag < 1:1608491‑M1/101‑25 (MQ=255) aGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagg > 1:806445‑M1/1‑76 (MQ=255) gCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaaggg < 1:1657952‑M1/101‑27 (MQ=255) cTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaaggga < 1:135378‑M1/101‑28 (MQ=255) cAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagc > 2:779810‑M1/1‑72 (MQ=255) cAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagc < 1:685830‑M1/101‑30 (MQ=255) gtaggtagAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcag < 1:646640‑M1/101‑32 (MQ=255) gtaggtagAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcag < 1:1493848‑M1/101‑32 (MQ=255) taggtagAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcaga < 1:794236‑M1/101‑33 (MQ=255) ggtagAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagact > 2:1608896‑M1/1‑67 (MQ=255) gtagAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactg > 2:772397‑M1/1‑66 (MQ=255) gagCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaa > 2:326152‑M1/1‑63 (MQ=255) aaCTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatct > 1:1447694‑M1/1‑59 (MQ=255) cTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgc > 2:480150‑M1/1‑57 (MQ=255) cTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgc < 2:425872‑M1/101‑45 (MQ=255) tGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgcc > 2:542880‑M1/1‑56 (MQ=255) tGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgcc < 1:1390605‑M1/101‑46 (MQ=255) tGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgcc > 2:1209157‑M1/1‑56 (MQ=255) ttGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtca < 2:408504‑M1/101‑50 (MQ=255) ttGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtca < 1:1049675‑M1/101‑50 (MQ=255) tGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcac > 1:791042‑M1/1‑51 (MQ=255) tGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcac < 1:1576508‑M1/101‑51 (MQ=255) tAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacag < 2:838182‑M1/101‑53 (MQ=255) tAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacag < 1:1139589‑M1/101‑53 (MQ=255) aaTCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacaga > 2:1288748‑M1/1‑48 (MQ=255) aaTCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacaga > 1:1491218‑M1/1‑48 (MQ=255) aTCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagac > 1:323185‑M1/1‑47 (MQ=255) aTCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagac < 1:710198‑M1/101‑55 (MQ=255) aTCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagac < 2:792149‑M1/101‑55 (MQ=255) cAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagactt < 2:619341‑M1/101‑57 (MQ=255) cAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagactt > 1:619454‑M1/1‑45 (MQ=255) aGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttc < 1:888306‑M1/101‑58 (MQ=255) aGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaa > 1:1471221‑M1/1‑41 (MQ=255) aGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaa < 2:1248361‑M1/101‑61 (MQ=255) tCACCAGTTCGATTCCGATAGTCGGCACCATTAAGTCCggtggagttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggt < 1:939949‑M1/101‑64 (MQ=255) aCCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttc > 2:230757‑M1/1‑36 (MQ=255) aCCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttc < 1:425860‑M1/101‑66 (MQ=255) ccAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcg < 2:522228‑M1/101‑67 (MQ=255) cAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggatcga > 2:200765‑M1/1‑34 (MQ=255) cAGTTCGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcgcccaaagggagcaggctgtaaatctgccgtcacagacttcgaaggttcga < 2:1410461‑M1/101‑68 (MQ=255) cgtTCGATTCCCGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagaccgtaaatctgccgtcacagacttcgaaggttcgaa < 2:1039770‑M1/100‑69 (MQ=255) cGATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcgaatcct < 1:491553‑M1/101‑73 (MQ=255) gATTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcgaatcctt > 1:344061‑M1/1‑28 (MQ=255) aTTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcgaatccttc < 1:779815‑M1/101‑75 (MQ=255) aTTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcgaatccttc > 1:1234119‑M1/1‑27 (MQ=255) aTTCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcgaatccttc > 1:930409‑M1/1‑27 (MQ=255) ttCCGGTAGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcgaatccttcc < 1:1104746‑M1/101‑76 (MQ=255) aGTCGGCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcgaatccttcccccacca < 2:1522061‑M1/101‑83 (MQ=255) gCACCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcgaatccttcccccaccaccaat < 1:1312259‑M1/101‑88 (MQ=255) aCCATCAAGTCCggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcacagacttcgaaggttcgaatccttcccccaccaccaattt > 1:194654‑M1/1‑12 (MQ=255) | AATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 183/6772‑6872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |