| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 178 | = 7327 | 0 (0.000) | 50 (0.700) | 47/182 | 0.0 | 67.6% | intergenic (–/–) | –/– | –/– |
| ? | 191 | = 2433 | 48 (0.680) | intergenic (–/–) | –/– | –/– | |||||
TTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 178/7227‑7327 | ttCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAG > 1:1200170‑M1/1‑101 (MQ=255) cATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGca < 1:509076‑M1/101‑3 (MQ=255) tCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagt > 2:1162356‑M1/1‑97 (MQ=255) gTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTGTGACAGCCCCCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaa > 2:1594943‑M1/1‑95 (MQ=255) tgtCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatc > 1:466998‑M1/1‑90 (MQ=255) ggTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcag < 2:1200165‑M1/101‑16 (MQ=255) ggTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcag > 2:657474‑M1/1‑86 (MQ=255) gTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGGGGATATGGCAGcggtaaaaatttcagg > 1:340339‑M1/1‑85 (MQ=255) ataAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgt > 2:1253837‑M1/1‑82 (MQ=255) taAATTCTGATTAGCCAGGTAACACAGTGTTATGCCAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtg < 2:1676647‑M1/101‑21 (MQ=255) aaTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgct > 1:1269501‑M1/1‑79 (MQ=255) aTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctg > 2:1584709‑M1/1‑78 (MQ=255) aTTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcaggaaaaatctcaggggtgctgaaagat > 1:1527767‑M1/1‑72 (MQ=255) aGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggt < 2:992826‑M1/101‑33 (MQ=255) aGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggt > 2:1384925‑M1/1‑69 (MQ=255) aGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgg < 2:1424641‑M1/101‑37 (MQ=255) ggTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcggg < 2:1141718‑M1/101‑38 (MQ=255) gTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcggga > 2:1028667‑M1/1‑63 (MQ=255) gTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcggga > 2:1058033‑M1/1‑63 (MQ=255) aaCACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaa < 1:919329‑M1/101‑41 (MQ=255) aaCACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaa > 1:1169849‑M1/1‑61 (MQ=255) acacAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaa > 1:1655126‑M1/1‑60 (MQ=255) cacaGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaac < 1:536042‑M1/101‑43 (MQ=255) aGTGTTGTGAGAGCCCGCAGGTTCAGGCGGGCTTTTTTGTGGAGTGGATACGTCAAcaataaaaatctcagttgtgctgaaagatggtgcgggaaaaccaa < 2:242527‑M1/101‑46 (MQ=255) gtgtTATGAGAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCACcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaat < 2:354139‑M1/101‑47 (MQ=255) aTGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacaga > 1:1113365‑M1/1‑50 (MQ=255) aTGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacaga > 1:432492‑M1/1‑50 (MQ=255) aTGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacaga < 1:361865‑M1/101‑52 (MQ=255) tGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaa > 2:249745‑M1/1‑49 (MQ=255) tGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaa < 2:1464060‑M1/101‑53 (MQ=255) gACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaac > 2:1405232‑M1/1‑48 (MQ=255) aCAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaact > 1:1670343‑M1/1‑47 (MQ=255) cAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgcgctgaaagatggtgcgggaaaaccaatacagaactg > 1:1692919‑M1/1‑46 (MQ=255) aGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgc > 1:331937‑M1/1‑45 (MQ=255) gCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgca < 2:1473750‑M1/101‑58 (MQ=255) cgccgGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcacta > 2:861205‑M1/1‑41 (MQ=255) gccgGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactat > 2:1406184‑M1/1‑40 (MQ=255) ggTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattca > 1:1462551‑M1/1‑37 (MQ=255) ggTTCAGGCGGGCTTTTNNNTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattca < 2:335290‑M1/101‑65 (MQ=255) tCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaact < 2:662090‑M1/101‑68 (MQ=255) cAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactg < 1:145138‑M1/101‑69 (MQ=255) aGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactga > 1:1476735‑M1/1‑32 (MQ=255) aGGCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactga > 2:60886‑M1/1‑32 (MQ=255) gCGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaag < 2:1432863‑M1/101‑72 (MQ=255) cGGGCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaagg > 1:1464700‑M1/1‑29 (MQ=255) gCTTTTTTGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaa < 1:312286‑M1/101‑76 (MQ=255) ttttttGTGGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaag > 1:598757‑M1/1‑24 (MQ=255) tgtgGAGTGGATATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaa < 1:715529‑M1/101‑83 (MQ=255) gtggagtggaTATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaac < 1:781742‑M1/101‑84 (MQ=255) agtggaTATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagca < 1:1058038‑M1/101‑88 (MQ=255) gaTATGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccac > 1:260832‑M1/1‑10 (MQ=255) atGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggt < 2:1651254‑M1/101‑95 (MQ=255) tGGCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaattgaaggcaaagcgtaacagcaccacggta < 1:1253842‑M1/101‑96 (MQ=255) ggCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtac < 1:657479‑M1/101‑97 (MQ=255) ggCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtac < 1:1384931‑M1/101‑97 (MQ=255) ggCAGcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtac < 2:1670337‑M1/101‑97 (MQ=255) gcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtact < 1:540542‑M1/101‑98 (MQ=255) gcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtact < 2:1072124‑M1/101‑98 (MQ=255) gcagcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtact > 1:1474760‑M1/1‑4 (MQ=255) gcagtaaaaatctcaggtgtgctgaaagatggtgcgggaaaaccaatacagaactgcactattcaactgaaggcaaagcgtaacagcaccacggtactggt > 2:775179‑M1/1‑1 (MQ=255) | TTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 178/7227‑7327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |