New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 172 | = 7705 | 0 (0.000) | 41 (0.900) +GCGTTCACGCCGCATCCGGCAGTTGGCGCACAA |
22/134 | 1.3 | 67.5% | intergenic (–/–) | –/– | –/– |
? | 58 | = 10294 | 59 (0.830) | intergenic (–/–) | –/– | –/– |
TGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 172/7605‑7705 | tGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAg < 2:1231540/101‑1 (MQ=255) gCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGg < 2:821091‑M1/101‑2 (MQ=255) ccGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGGTGCTTTATAAAACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgc > 2:1197095‑M1/1‑99 (MQ=255) gTGCTTTGCGAGTTGCGCCGGGAACCGGCGGGTGAGATTGCGCAAGCGGTGCTTAATAACACCTATACGTTGTTTAACGTGCCCGAGGCCCGGTAAGgcgt > 2:567168‑M1/1‑97 (MQ=255) gTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgt > 1:1360591‑M1/1‑97 (MQ=255) cTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTTCCGTAGGCCGGATAAGgcgttca < 1:1378171‑M1/101‑8 (MQ=255) tttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcac < 1:193401‑M1/101‑9 (MQ=255) tttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcac < 1:25070‑M1/101‑9 (MQ=255) ttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacg < 1:236723‑M1/101‑10 (MQ=255) gCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgcc < 1:629511‑M1/101‑12 (MQ=255) gTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcat < 1:988561‑M1/101‑16 (MQ=255) tGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatcc < 1:401031‑M1/101‑18 (MQ=255) cGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcag > 1:508522‑M1/1‑79 (MQ=255) gggAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttgacgccgcatccggcagt > 2:1598629‑M1/1‑78 (MQ=255) ggAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagtt < 1:103944‑M1/101‑25 (MQ=255) aaCCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttgg > 2:183930‑M1/1‑75 (MQ=255) cggcggATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgc > 2:337886‑M1/1‑72 (MQ=255) gcggATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcac > 1:701125‑M1/1‑70 (MQ=255) ggATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaa > 2:1301593‑M1/1‑68 (MQ=255) gATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaat < 1:235303‑M1/101‑35 (MQ=255) gATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaat < 2:1580899‑M1/101‑35 (MQ=255) tGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatg < 2:1362479‑M1/101‑43 (MQ=255) gcAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcga > 1:1053449‑M1/1‑56 (MQ=255) cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgac > 2:1441191‑M1/1‑55 (MQ=255) cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgac > 2:245690‑M1/1‑55 (MQ=255) cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgac > 1:711828‑M1/1‑55 (MQ=255) cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgac > 2:1572264‑M1/1‑55 (MQ=255) aGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgc < 2:1133852‑M1/101‑49 (MQ=255) cGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgctt > 1:302759‑M1/1‑51 (MQ=255) gTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATGATgcgttcacgccgcatccggcagttggcgcccaatgcctgatgcgacgctta < 2:468748‑M1/101‑52 (MQ=255) ttGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaa < 1:319101‑M1/101‑53 (MQ=255) tGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaac > 2:1665480‑M1/1‑48 (MQ=255) gCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacg < 2:1550627‑M1/101‑55 (MQ=255) cTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacactgcctgatgcggcgcttaacgc > 1:672535‑M1/1‑46 (MQ=255) cTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgc > 1:1617930‑M1/1‑46 (MQ=255) ttAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcg > 1:751860‑M1/1‑45 (MQ=255) ttAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcg < 1:740678‑M1/101‑57 (MQ=255) taataaCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgt > 1:992836‑M1/1‑44 (MQ=255) taataaCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgt > 1:621642‑M1/1‑44 (MQ=255) acacGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttat > 1:751938‑M1/1‑39 (MQ=255) tataCGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgc > 1:1627736‑M1/1‑34 (MQ=255) tataCGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgc > 1:1695166‑M1/1‑34 (MQ=255) taCGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcct > 2:366115‑M1/1‑32 (MQ=255) taCGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcct > 2:593632‑M1/1‑32 (MQ=255) gttgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctaca < 2:952135‑M1/101‑73 (MQ=255) gttgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctaca < 1:500818‑M1/101‑73 (MQ=255) ttgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacag > 2:266471‑M1/1‑28 (MQ=255) tgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacagg < 2:1453428‑M1/101‑75 (MQ=255) tgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacagg < 2:1453470‑M1/101‑75 (MQ=255) tgttTAACGTGCCGTAGGCCGGATAAGgcgttcacaccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacacg > 1:1624434‑M1/1‑27 (MQ=255) tttAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtt > 1:516711‑M1/1‑25 (MQ=255) tAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttg < 1:515874‑M1/101‑79 (MQ=255) tAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttg > 1:971508‑M1/1‑23 (MQ=255) tAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttg > 2:525085‑M1/1‑23 (MQ=255) tAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttg < 1:632476‑M1/101‑79 (MQ=255) aaCGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgt < 1:525090‑M1/101‑80 (MQ=255) aaCGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgt < 2:751855‑M1/101‑80 (MQ=255) gTGCAGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgtgcc > 1:1346880‑M1/1‑19 (MQ=255) aaccgtAGGCCGGATAAGgcgttcacgccgcatccggcagtcggcgcataatgcctgatgcgacgcttgtcgcgtcttatcatgcctacaggtttgtgccg < 2:701120‑M1/99‑84 (MQ=255) gCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgtgccga > 2:1108163‑M1/1‑17 (MQ=255) | TGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 172/7605‑7705 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |