New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 172 = 77050 (0.000)41 (0.900)
+GCGTTCACGCCGCATCCGGCAGTTGGCGCACAA
22/134 1.3 67.5% intergenic (–/–) –/– –/–
?58 = 10294 59 (0.830)intergenic (–/–) –/– –/–

TGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  172/7605‑7705
                                                                                                    |                                                                                    
tGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAg                                                                                      <  2:1231540/101‑1 (MQ=255)
 gCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGg                                                                                     <  2:821091‑M1/101‑2 (MQ=255)
  ccGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGGTGCTTTATAAAACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgc                                                                                    >  2:1197095‑M1/1‑99 (MQ=255)
    gTGCTTTGCGAGTTGCGCCGGGAACCGGCGGGTGAGATTGCGCAAGCGGTGCTTAATAACACCTATACGTTGTTTAACGTGCCCGAGGCCCGGTAAGgcgt                                                                                  >  2:567168‑M1/1‑97 (MQ=255)
    gTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgt                                                                                  >  1:1360591‑M1/1‑97 (MQ=255)
       cTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTTCCGTAGGCCGGATAAGgcgttca                                                                               <  1:1378171‑M1/101‑8 (MQ=255)
        tttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcac                                                                              <  1:193401‑M1/101‑9 (MQ=255)
        tttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcac                                                                              <  1:25070‑M1/101‑9 (MQ=255)
         ttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacg                                                                             <  1:236723‑M1/101‑10 (MQ=255)
           gCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgcc                                                                           <  1:629511‑M1/101‑12 (MQ=255)
               gTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcat                                                                       <  1:988561‑M1/101‑16 (MQ=255)
                 tGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatcc                                                                     <  1:401031‑M1/101‑18 (MQ=255)
                      cGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcag                                                                >  1:508522‑M1/1‑79 (MQ=255)
                       gggAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttgacgccgcatccggcagt                                                               >  2:1598629‑M1/1‑78 (MQ=255)
                        ggAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagtt                                                              <  1:103944‑M1/101‑25 (MQ=255)
                          aaCCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttgg                                                            >  2:183930‑M1/1‑75 (MQ=255)
                             cggcggATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgc                                                         >  2:337886‑M1/1‑72 (MQ=255)
                               gcggATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcac                                                       >  1:701125‑M1/1‑70 (MQ=255)
                                 ggATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaa                                                     >  2:1301593‑M1/1‑68 (MQ=255)
                                  gATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaat                                                    <  1:235303‑M1/101‑35 (MQ=255)
                                  gATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaat                                                    <  2:1580899‑M1/101‑35 (MQ=255)
                                          tGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatg                                            <  2:1362479‑M1/101‑43 (MQ=255)
                                             gcAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcga                                         >  1:1053449‑M1/1‑56 (MQ=255)
                                              cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgac                                        >  2:1441191‑M1/1‑55 (MQ=255)
                                              cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgac                                        >  2:245690‑M1/1‑55 (MQ=255)
                                              cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgac                                        >  1:711828‑M1/1‑55 (MQ=255)
                                              cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgac                                        >  2:1572264‑M1/1‑55 (MQ=255)
                                                aGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgc                                      <  2:1133852‑M1/101‑49 (MQ=255)
                                                  cGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgctt                                    >  1:302759‑M1/1‑51 (MQ=255)
                                                   gTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATGATgcgttcacgccgcatccggcagttggcgcccaatgcctgatgcgacgctta                                   <  2:468748‑M1/101‑52 (MQ=255)
                                                    ttGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaa                                  <  1:319101‑M1/101‑53 (MQ=255)
                                                     tGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaac                                 >  2:1665480‑M1/1‑48 (MQ=255)
                                                      gCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacg                                <  2:1550627‑M1/101‑55 (MQ=255)
                                                       cTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacactgcctgatgcggcgcttaacgc                               >  1:672535‑M1/1‑46 (MQ=255)
                                                       cTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgc                               >  1:1617930‑M1/1‑46 (MQ=255)
                                                        ttAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcg                              >  1:751860‑M1/1‑45 (MQ=255)
                                                        ttAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcg                              <  1:740678‑M1/101‑57 (MQ=255)
                                                         taataaCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgt                             >  1:992836‑M1/1‑44 (MQ=255)
                                                         taataaCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgt                             >  1:621642‑M1/1‑44 (MQ=255)
                                                              acacGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttat                        >  1:751938‑M1/1‑39 (MQ=255)
                                                                   tataCGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgc                   >  1:1627736‑M1/1‑34 (MQ=255)
                                                                   tataCGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgc                   >  1:1695166‑M1/1‑34 (MQ=255)
                                                                     taCGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcct                 >  2:366115‑M1/1‑32 (MQ=255)
                                                                     taCGTTGTTTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcct                 >  2:593632‑M1/1‑32 (MQ=255)
                                                                        gttgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctaca              <  2:952135‑M1/101‑73 (MQ=255)
                                                                        gttgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctaca              <  1:500818‑M1/101‑73 (MQ=255)
                                                                         ttgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacag             >  2:266471‑M1/1‑28 (MQ=255)
                                                                          tgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacagg            <  2:1453428‑M1/101‑75 (MQ=255)
                                                                          tgttTAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacagg            <  2:1453470‑M1/101‑75 (MQ=255)
                                                                          tgttTAACGTGCCGTAGGCCGGATAAGgcgttcacaccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacacg            >  1:1624434‑M1/1‑27 (MQ=255)
                                                                            tttAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtt          >  1:516711‑M1/1‑25 (MQ=255)
                                                                              tAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttg        <  1:515874‑M1/101‑79 (MQ=255)
                                                                              tAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttg        >  1:971508‑M1/1‑23 (MQ=255)
                                                                              tAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttg        >  2:525085‑M1/1‑23 (MQ=255)
                                                                              tAACGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttg        <  1:632476‑M1/101‑79 (MQ=255)
                                                                               aaCGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgt       <  1:525090‑M1/101‑80 (MQ=255)
                                                                               aaCGTGCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgt       <  2:751855‑M1/101‑80 (MQ=255)
                                                                                  gTGCAGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgtgcc    >  1:1346880‑M1/1‑19 (MQ=255)
                                                                                   aaccgtAGGCCGGATAAGgcgttcacgccgcatccggcagtcggcgcataatgcctgatgcgacgcttgtcgcgtcttatcatgcctacaggtttgtgccg   <  2:701120‑M1/99‑84 (MQ=255)
                                                                                    gCCGTAGGCCGGATAAGgcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgtgccga  >  2:1108163‑M1/1‑17 (MQ=255)
                                                                                                    |                                                                                    
TGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  172/7605‑7705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.