| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 170 | = 7767 | 0 (0.000) | 64 (0.070) +CT |
50/196 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 223 | = 698 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GGTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 170/7667‑7767 | ggTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCaa > 1:1335621/1‑101 (MQ=255) gTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAAc < 2:1549177‑M1/101‑2 (MQ=255) gTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAAc < 1:1195171‑M1/101‑2 (MQ=255) tATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAAct > 2:1364098‑M1/1‑99 (MQ=255) aTCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActt > 2:531162‑M1/1‑98 (MQ=255) tCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGAGATGCTGCCAActta < 1:746855‑M1/101‑5 (MQ=255) gCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtact < 2:508414‑M1/101‑7 (MQ=255) ccTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactg < 1:918057‑M1/101‑8 (MQ=255) cTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactga < 2:617845‑M1/101‑9 (MQ=255) tACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgat > 1:346739‑M1/1‑92 (MQ=255) gAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttag < 1:198144‑M1/101‑14 (MQ=255) aGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagt < 2:1611126‑M1/101‑15 (MQ=255) tGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactcatttagtgta < 2:1140354‑M1/101‑18 (MQ=255) gCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatga < 1:508611‑M1/101‑21 (MQ=255) cAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgat > 1:190651‑M1/1‑80 (MQ=255) cAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgat > 2:1258857‑M1/1‑80 (MQ=255) aaaGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatg < 1:637458‑M1/101‑23 (MQ=255) aaaGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatg > 2:49392‑M1/1‑79 (MQ=255) aaGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatgg < 1:742116‑M1/101‑24 (MQ=255) agagAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggt < 2:500715‑M1/101‑25 (MQ=255) gagaAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtg < 2:1358032‑M1/101‑26 (MQ=255) gaAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtt < 1:250587‑M1/101‑28 (MQ=255) aaaTTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgttt > 1:676419‑M1/1‑73 (MQ=255) aaaTTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgttt > 2:299053‑M1/1‑73 (MQ=255) aTTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGCTGCTGCCAActtactgatttagtgtatgatggtgctttt > 2:486392‑M1/1‑71 (MQ=255) aTTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgttttt > 1:1338900‑M1/1‑71 (MQ=255) tttCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttg < 2:1645491‑M1/101‑32 (MQ=255) tttCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttg < 1:749567‑M1/101‑32 (MQ=255) tttCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCGCCGGTGATGCTGCCAActtactgatttagtgtatgatggtttttttg < 2:254638‑M1/101‑32 (MQ=255) ttCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttga > 1:1421551‑M1/1‑69 (MQ=255) ccTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgagg < 1:531167‑M1/101‑35 (MQ=255) tttCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgc > 1:310343‑M1/1‑64 (MQ=255) tctctcGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctc < 2:939911‑M1/101‑40 (MQ=255) ctctcGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctcc < 2:351090‑M1/101‑41 (MQ=255) ctctcGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctcc > 2:1608290‑M1/1‑61 (MQ=255) ctctcGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctcc > 2:790173‑M1/1‑61 (MQ=255) tctcGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctcca < 2:1647301‑M1/101‑42 (MQ=255) ctcGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccag < 2:538700‑M1/101‑43 (MQ=255) tcGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagt > 1:771890‑M1/1‑58 (MQ=255) tcGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagt > 2:1565728‑M1/1‑58 (MQ=255) tcGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagt > 1:1526923‑M1/1‑58 (MQ=255) cGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtg > 1:153293‑M1/1‑57 (MQ=255) cGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtg > 2:1643771‑M1/1‑57 (MQ=255) gTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtgg > 2:319703‑M1/1‑56 (MQ=255) tttcCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct < 2:619055‑M1/101‑51 (MQ=255) tttcCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct < 1:730228‑M1/101‑51 (MQ=255) tttcCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct > 1:1357058‑M1/1‑51 (MQ=255) tttcCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct < 1:522106‑M1/101‑51 (MQ=255) tcgtcATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat < 1:232702‑M1/101‑59 (MQ=255) tcgtcATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat < 1:990712‑M1/101‑59 (MQ=255) tcatcaAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag > 2:212657‑M1/1‑40 (MQ=255) catcaAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc > 1:764749‑M1/1‑39 (MQ=255) atcaAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctcttgcag < 2:1703514‑M1/101‑64 (MQ=255) atcaAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct > 2:1124524‑M1/1‑38 (MQ=255) atcaAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct < 1:1179800‑M1/101‑64 (MQ=255) tcaAACTATTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg < 1:1627174‑M1/101‑65 (MQ=255) aTTTGACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgcttctatcagctgtccctcc > 1:385563‑M1/1‑30 (MQ=255) gACCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt < 2:1603261‑M1/101‑76 (MQ=255) aCCCATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc > 2:1297046‑M1/1‑25 (MQ=255) cccATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca < 1:1519009‑M1/101‑78 (MQ=255) ccATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag > 1:1044617‑M1/1‑23 (MQ=255) cATTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc > 1:1464823‑M1/1‑22 (MQ=255) aTTCTCCGGTGATGCTGCCAActtactgatttagtgtatgctggtgtttttgaggtgctccaggggcttctgtttctatcagctgtccctcctgttccgct > 1:356843‑M1/1‑21 (MQ=255) aTTCTCCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagct > 2:1249680‑M1/1‑21 (MQ=255) ctcCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact > 2:904195‑M1/1‑18 (MQ=255) tcCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg < 2:812521‑M1/101‑85 (MQ=255) tcCGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg > 1:210947‑M1/1‑17 (MQ=255) ccGGTGATGCTGCCAActtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgc > 2:1586407‑M1/1‑16 (MQ=255) | GGTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 170/7667‑7767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |