| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 168 | 3213 = | 44 (0.730) | 10 (0.340) +GCAGTCGGCGCAT |
8/174 | 0.2 | 34.3% | intergenic (–/–) | –/– | –/– |
| ? | 92 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GGACGTTGGCGCTCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGC > 168/3114‑3313 | ggACGTTGGCGCTCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCg < 1:1405353/101‑1 (MQ=255) gACGTTGGCGCTCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCgg < 1:891038/101‑1 (MQ=255) gTTGGCGCTCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATg < 1:316495/101‑1 (MQ=255) tGGCGCTCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATgcg > 2:1403051/1‑101 (MQ=255) ggCGCTCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATgcgg < 2:458016/101‑1 (MQ=255) cTCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTg > 1:1481765/1‑101 (MQ=255) cTCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTg > 1:775564/1‑101 (MQ=255) tCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGa > 1:1457541/1‑101 (MQ=255) aTCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAAc < 2:331609/101‑1 (MQ=255) ccGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCa > 1:355046/1‑101 (MQ=255) gAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCatt > 2:1710055/1‑101 (MQ=255) aaTTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTc < 1:1211149/101‑1 (MQ=255) cGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGcc < 1:1038555/101‑1 (MQ=255) cGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGcc < 2:1325081/101‑1 (MQ=255) tGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGt > 1:617718/1‑101 (MQ=255) ggTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTc > 2:77073/1‑101 (MQ=255) tAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTcgc > 1:648727/1‑101 (MQ=255) cTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCACGTCGGATGCGGCGTGAACGCATTATTCGGCCTCCGGTTCGCGTaa > 2:257972/1‑100 (MQ=255) ccACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAg < 1:279659/101‑1 (MQ=255) caacaGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGAtt < 2:1321731/101‑1 (MQ=255) aacaGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGAttt > 1:212744/1‑101 (MQ=255) aacaGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGAttt > 1:38947/1‑101 (MQ=255) aacaGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGAttt > 2:530503/1‑101 (MQ=255) aggcatgataagacgcgacaagcgtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGt > 1:1442623‑M1/52‑101 (MQ=255) caGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGt < 1:1612128/101‑1 (MQ=255) caGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGt < 1:307748/101‑1 (MQ=255) gCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAg < 1:1403057/101‑1 (MQ=255) ggAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCa < 1:1684193/101‑1 (MQ=255) gataagacgcgacaagcgtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGTAGGCAt < 1:600441‑M1/56‑1 (MQ=255) ataagacgcgacaagcgtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGTAGGCATg > 2:605028‑M1/45‑101 (MQ=255) ataagacgcgacaagcgtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGTAGGCATg < 1:1416116‑M1/57‑1 (MQ=255) aagacgcgacaagcgtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGTAGGCATGAt > 2:42124‑M1/43‑101 (MQ=255) gcATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATa > 1:376396/1‑101 (MQ=255) cATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATaa < 2:775559/101‑1 (MQ=255) acgcgacaagcgtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGTAGGCATGATAAg > 1:529623‑M1/40‑101 (MQ=255) aTGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAg > 2:1513166/1‑101 (MQ=255) gcgacaagcgtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGTAGGCATGATAAGAc > 1:510299‑M1/38‑101 (MQ=255) cgacaagcgtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGTAGGCATGATAAGAcg < 1:607964‑M1/65‑1 (MQ=255) cccGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGt < 2:1481759/101‑1 (MQ=255) ggtgAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGCGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAg < 1:505016/98‑1 (MQ=255) cgtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGTAGGCATGAtaagacgcgacaag > 1:1031836‑M1/30‑96 (MQ=255) gtcgcatcaggcattatgcgccgactgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCG‑GCACAGACTTGTAGGCATGataagacgcgacaagc > 1:890976‑M1/29‑95 (MQ=255) aaGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTc > 1:1249757/1‑101 (MQ=255) aGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCg > 1:660876/1‑101 (MQ=255) gattTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCgcatca > 2:1628374/1‑101 (MQ=255) gattTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCgcatca < 1:1058996/101‑1 (MQ=255) attTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCgcatcag > 2:40230/1‑101 (MQ=255) ttAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCgcatcaggc > 1:1043686/1‑101 (MQ=255) gAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCgcatcaggcatca < 2:1317482/101‑1 (MQ=255) cAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGcaca > 2:365263/1‑101 (MQ=255) cAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGcaca > 1:899189/1‑101 (MQ=255) aGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACaa > 1:574532/1‑101 (MQ=255) aGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACaa > 2:947918/1‑101 (MQ=255) gTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAAt < 1:304591/101‑1 (MQ=255) cGGATGCGGCGTGAACGCCTTATCCGGCCTACCGTTCAGGCGCAGGTTTGTAGGCATGATAAGATGTGCCAGCGTCGCATCAGGCATCCGCGCACAATTGc > 2:871512/1‑101 (MQ=2) | GGACGTTGGCGCTCATCCCGAGCAATTCGCACATGGGTAACCTCCACAACAGCGGGAGCGCATGGCCCCCGGCGAAGATTGATTTAAGAATTTTCAGGTCGGATGCGGCGTGAACGCATTATTCGGCCTACGGTTCGCGTACAGATTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCAGCGCACAAATGC > 168/3114‑3313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |