| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 16 | = 47700 | 0 (0.000) | 58 (0.940) +GCAGCA |
49/188 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 190 | = 6342 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTTAGTGGTGGATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 16/47601‑47700 | gTTAGTGGTGGATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGGAGGCg > 2:1646507‑M1/1‑100 (MQ=255) ttAGTGGTGGATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgc < 1:1176721‑M1/101‑3 (MQ=255) aGTGGTGGATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcag < 2:243446‑M1/101‑5 (MQ=255) aGTGGTGGATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcag > 2:743359‑M1/1‑97 (MQ=255) gtggATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagc > 2:587690‑M1/1‑93 (MQ=255) gacggttcCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccat > 1:1428717‑M1/4‑90 (MQ=255) gATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccat > 1:1270056‑M1/1‑90 (MQ=255) ggTTCCATCCCATTAAAAGATAACGGTATTGATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattat < 1:1128748‑M1/101‑15 (MQ=255) gTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatc > 2:1285753‑M1/1‑86 (MQ=255) ttCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcg < 2:1702687‑M1/101‑17 (MQ=255) aTCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctat > 2:1687053‑M1/1‑81 (MQ=255) aTCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctat > 1:702522‑M1/1‑81 (MQ=255) tCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatc > 2:1414587‑M1/1‑80 (MQ=255) cATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggt < 1:388047‑M1/101‑25 (MQ=255) aTTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggtt < 2:138542‑M1/101‑26 (MQ=255) aTTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggtt > 2:148446‑M1/1‑76 (MQ=255) aaaaGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcct < 1:372460‑M1/101‑29 (MQ=255) aaaGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctg < 1:94907‑M1/101‑30 (MQ=255) aaGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgc > 1:544557‑M1/1‑71 (MQ=255) gATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctc < 2:241875‑M1/101‑33 (MQ=255) aTAACGGTATTTATTGCATGTTTGCCGTTGAGCCGATTGTGGATCCCATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctct < 2:1527591‑M1/101‑34 (MQ=255) ggTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtg > 2:1606055‑M1/1‑63 (MQ=255) gTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcgggtcctgctctgcgtgg > 2:920740‑M1/1‑62 (MQ=255) atttattGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtgggg > 1:1166952‑M1/1‑60 (MQ=255) ttattGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcg > 2:861774‑M1/1‑58 (MQ=255) tattGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcgg > 1:1694736‑M1/1‑57 (MQ=255) tattGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtgggccgg > 1:822851‑M1/1‑57 (MQ=255) attGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggt > 2:1524704‑M1/1‑56 (MQ=255) cATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttg > 1:649901‑M1/1‑52 (MQ=255) aTGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgc > 2:349357‑M1/1‑51 (MQ=255) aTGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgc > 2:170293‑M1/1‑51 (MQ=255) ggTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccg < 1:1071757‑M1/101‑53 (MQ=255) gTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgc > 2:1713967‑M1/1‑48 (MQ=255) cGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctg > 2:217020‑M1/1‑43 (MQ=255) cGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctg > 2:456552‑M1/1‑43 (MQ=255) tGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggag < 1:451233‑M1/101‑62 (MQ=255) gAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagt < 1:140255‑M1/101‑63 (MQ=255) gcggattGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagtta < 2:511332‑M1/98‑65 (MQ=255) ccaattgTGAATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaa < 2:1166947‑M1/98‑66 (MQ=255) gATTGTGGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacc > 2:472265‑M1/1‑34 (MQ=255) tgtgGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaa > 2:1471972‑M1/1‑31 (MQ=255) tgGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaact > 2:1262125‑M1/1‑29 (MQ=255) tgGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaact < 1:349357‑M1/101‑73 (MQ=255) tgGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaact > 1:1328802‑M1/1‑29 (MQ=255) tgGATCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaact < 1:751689‑M1/101‑73 (MQ=255) gagcacatccGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactgg < 2:1284769‑M1/98‑75 (MQ=255) tCACATCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcg > 2:60526‑M1/1‑25 (MQ=255) caTCCGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcag < 1:148446‑M1/101‑80 (MQ=255) tcggcaaCGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtc < 2:1597744‑M1/98‑82 (MQ=255) cGCAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcag > 1:1337208‑M1/1‑18 (MQ=255) cAAAGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcc < 1:730185‑M1/101‑86 (MQ=255) aaaGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcct < 1:1606061‑M1/101‑87 (MQ=255) aaGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctg < 1:181586‑M1/101‑88 (MQ=255) aaGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctg < 1:1524710‑M1/101‑88 (MQ=255) aaGCGGCGGAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctg < 2:649896‑M1/101‑88 (MQ=255) ggcggAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctgcaag < 1:1663110‑M1/101‑92 (MQ=255) gcggAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctgcaaga > 1:900331‑M1/1‑9 (MQ=255) ggAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctgcaagaag < 1:1687059‑M1/101‑95 (MQ=255) ggAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctgcaagaag > 1:951904‑M1/1‑7 (MQ=255) gAAGGCgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctgcaagaagt > 2:1458110‑M1/1‑6 (MQ=255) gcgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctgcaagaagttctg < 2:321171‑M1/101‑100 (MQ=255) cgcagcagccattatcgctatcggttcctgctctgcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcctgcaagaagttctgc > 2:1175392‑M1/1‑1 (MQ=255) | GTTAGTGGTGGATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 16/47601‑47700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |