New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 158 1 =0 (0.000)68 (0.070)
+CT
48/196 0.5 100% intergenic (–/–) –/– –/–
?223 = 698 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATATTCTAA  >  158/1‑101
                                                                                      |                                                                                                    
gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc                                                                                        <  1:1006836‑M1/15‑1 (MQ=255)
gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc                                                                                        >  1:1084117‑M1/87‑101 (MQ=255)
gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc                                                                                        >  2:11653‑M1/87‑101 (MQ=255)
gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc                                                                                        >  2:1504259‑M1/87‑101 (MQ=255)
gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc                                                                                        >  2:353979‑M1/87‑101 (MQ=255)
gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc                                                                                        >  1:585652‑M1/87‑101 (MQ=255)
gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc                                                                                        >  1:1227265‑M1/87‑101 (MQ=255)
gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc                                                                                        <  1:646270‑M1/15‑1 (MQ=255)
      agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCta                                                                                  <  1:882320‑M1/21‑1 (MQ=255)
        ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCAtcacccaaatatcc                                                                                >  2:660195‑M1/79‑95 (MQ=255)
         tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatactctaaatcagtaagTTGGCAGCATCACCCAATCTatat                                                                               >  2:1573720‑M1/78‑101 (MQ=255)
         tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTatat                                                                               <  1:927287‑M1/24‑1 (MQ=255)
         tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTatat                                                                               >  1:746491‑M1/78‑101 (MQ=255)
            acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTaa                                                                            <  2:1046839‑M1/27‑1 (MQ=255)
            acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTaa                                                                            <  2:952949‑M1/27‑1 (MQ=255)
                gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAAt                                                                        >  2:356070‑M1/71‑101 (MQ=255)
                     acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCAt                                                                   >  1:677502‑M1/66‑101 (MQ=255)
                      cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATg                                                                  >  2:1655618‑M1/65‑101 (MQ=255)
                          tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAAt                                                              <  1:1208673‑M1/41‑1 (MQ=255)
                            atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagGTGGCAGCATCACCCAATCTATATTAAACATGACATGAAATGt                                                            <  2:197040‑M1/43‑1 (MQ=255)
                              agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGtaa                                                          <  1:144812‑M1/45‑1 (MQ=255)
                                aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGtaata                                                        >  1:270147‑M1/55‑101 (MQ=255)
                                 aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGtaataa                                                       >  2:1370377‑M1/54‑101 (MQ=255)
                                    agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATgg                                                    <  1:339176‑M1/51‑1 (MQ=255)
                                    agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATgg                                                    <  1:279303‑M1/51‑1 (MQ=255)
                                      aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGat                                                  >  2:927282‑M1/49‑101 (MQ=255)
                                       agccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGata                                                 >  1:179992‑M1/48‑101 (MQ=255)
                                          cactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCGCCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGatatat                                              >  1:1641083‑M1/45‑101 (MQ=255)
                                             tggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTtc                                           <  2:435079‑M1/60‑1 (MQ=255)
                                                  cacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCa                                      <  1:966457‑M1/65‑1 (MQ=255)
                                                   acctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCaa                                     <  2:1560277‑M1/66‑1 (MQ=255)
                                                   acctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCaa                                     <  2:1295011‑M1/66‑1 (MQ=255)
                                                    cctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAg                                    <  1:1119343‑M1/67‑1 (MQ=255)
                                                    cctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAg                                    <  1:848368‑M1/67‑1 (MQ=255)
                                                    cctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAg                                    <  1:330601‑M1/67‑1 (MQ=255)
                                                     ctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAgg                                   >  1:140574‑M1/34‑101 (MQ=255)
                                                        aaaaacaccatcatacactaaatcagtaagTTGGCAGCCTCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAg                                >  2:853418‑M1/31‑101 (MQ=255)
                                                        aaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAg                                <  1:1685790‑M1/71‑1 (MQ=255)
                                                        aaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAg                                <  1:275903‑M1/71‑1 (MQ=255)
                                                          aaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGAt                              <  1:385326‑M1/73‑1 (MQ=255)
                                                            acaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTc                            >  1:1248754‑M1/27‑101 (MQ=255)
                                                             caccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTca                           >  1:48845‑M1/26‑101 (MQ=255)
                                                             caccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTca                           >  2:1356292‑M1/26‑101 (MQ=255)
                                                             caccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTca                           <  2:125720‑M1/76‑1 (MQ=255)
                                                              accatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcag                          <  1:1135443‑M1/77‑1 (MQ=255)
                                                               ccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagc                         <  1:1681512‑M1/78‑1 (MQ=255)
                                                               ccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagc                         >  1:324744‑M1/24‑101 (MQ=255)
                                                                catcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagca                        >  2:990776‑M1/23‑101 (MQ=255)
                                                                 atcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagcag                       <  1:1433713‑M1/80‑1 (MQ=255)
                                                                 atcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagcag                       <  1:32472‑M1/80‑1 (MQ=255)
                                                                   catacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGtt                     >  1:1210662‑M1/20‑101 (MQ=255)
                                                                   catacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGtt                     >  2:338737‑M1/20‑101 (MQ=255)
                                                                      acactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTaaa                  <  2:354420‑M1/85‑1 (MQ=255)
                                                                      acactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTaaa                  >  2:1119338‑M1/17‑101 (MQ=255)
                                                                        actaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaata                >  1:503210‑M1/15‑101 (MQ=255)
                                                                        actaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaata                >  2:1660780‑M1/15‑101 (MQ=255)
                                                                         ctaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaataa               >  1:857675‑M1/14‑101 (MQ=255)
                                                                          taaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaataat              <  1:1514444‑M1/89‑1 (MQ=255)
                                                                          taaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaataat              <  2:197138‑M1/89‑1 (MQ=255)
                                                                           aaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAAtt             >  1:1635365‑M1/12‑101 (MQ=255)
                                                                           aaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAAtt             >  2:1391378‑M1/12‑101 (MQ=255)
                                                                            aatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTa            <  1:1697722‑M1/91‑1 (MQ=255)
                                                                            aagcagcaagTTGGCAGCCTCACCTAATCTATCTTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTa            >  2:297992‑M1/11‑101 (MQ=255)
                                                                              tcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTaaa          >  2:1665613‑M1/9‑101 (MQ=255)
                                                                                agtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAata        <  2:210575‑M1/95‑1 (MQ=255)
                                                                                agtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAata        >  2:1400296‑M1/7‑101 (MQ=255)
                                                                                 gtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAatat       <  2:204903‑M1/96‑1 (MQ=255)
                                                                                  taagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATAtt      >  1:952954‑M1/5‑101 (MQ=255)
                                                                                    agTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATATTCt    >  1:794965‑M1/3‑101 (MQ=255)
                                                                                      ttGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATATTCTaa  <  1:435084/101‑1 (MQ=255)
                                                                                      |                                                                                                    
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATATTCTAA  >  158/1‑101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.