New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 158 | 1 = | 0 (0.000) | 68 (0.070) +CT |
48/196 | 0.5 | 100% | intergenic (–/–) | –/– | –/– |
? | 223 | = 698 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATATTCTAA > 158/1‑101 | gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc < 1:1006836‑M1/15‑1 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc > 1:1084117‑M1/87‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc > 2:11653‑M1/87‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc > 2:1504259‑M1/87‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc > 2:353979‑M1/87‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc > 1:585652‑M1/87‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc > 1:1227265‑M1/87‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCAccc < 1:646270‑M1/15‑1 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCta < 1:882320‑M1/21‑1 (MQ=255) ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCAtcacccaaatatcc > 2:660195‑M1/79‑95 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatactctaaatcagtaagTTGGCAGCATCACCCAATCTatat > 2:1573720‑M1/78‑101 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTatat < 1:927287‑M1/24‑1 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTatat > 1:746491‑M1/78‑101 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTaa < 2:1046839‑M1/27‑1 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTaa < 2:952949‑M1/27‑1 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAAt > 2:356070‑M1/71‑101 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCAt > 1:677502‑M1/66‑101 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATg > 2:1655618‑M1/65‑101 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAAt < 1:1208673‑M1/41‑1 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagGTGGCAGCATCACCCAATCTATATTAAACATGACATGAAATGt < 2:197040‑M1/43‑1 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGtaa < 1:144812‑M1/45‑1 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGtaata > 1:270147‑M1/55‑101 (MQ=255) aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGtaataa > 2:1370377‑M1/54‑101 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATgg < 1:339176‑M1/51‑1 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATgg < 1:279303‑M1/51‑1 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGat > 2:927282‑M1/49‑101 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGata > 1:179992‑M1/48‑101 (MQ=255) cactggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCGCCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGatatat > 1:1641083‑M1/45‑101 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTtc < 2:435079‑M1/60‑1 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCa < 1:966457‑M1/65‑1 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCaa < 2:1560277‑M1/66‑1 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCaa < 2:1295011‑M1/66‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAg < 1:1119343‑M1/67‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAg < 1:848368‑M1/67‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAg < 1:330601‑M1/67‑1 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAgg > 1:140574‑M1/34‑101 (MQ=255) aaaaacaccatcatacactaaatcagtaagTTGGCAGCCTCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAg > 2:853418‑M1/31‑101 (MQ=255) aaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAg < 1:1685790‑M1/71‑1 (MQ=255) aaaaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAg < 1:275903‑M1/71‑1 (MQ=255) aaacaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGAt < 1:385326‑M1/73‑1 (MQ=255) acaccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTc > 1:1248754‑M1/27‑101 (MQ=255) caccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTca > 1:48845‑M1/26‑101 (MQ=255) caccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTca > 2:1356292‑M1/26‑101 (MQ=255) caccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTca < 2:125720‑M1/76‑1 (MQ=255) accatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcag < 1:1135443‑M1/77‑1 (MQ=255) ccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagc < 1:1681512‑M1/78‑1 (MQ=255) ccatcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagc > 1:324744‑M1/24‑101 (MQ=255) catcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagca > 2:990776‑M1/23‑101 (MQ=255) atcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagcag < 1:1433713‑M1/80‑1 (MQ=255) atcatacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTcagcag < 1:32472‑M1/80‑1 (MQ=255) catacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGtt > 1:1210662‑M1/20‑101 (MQ=255) catacactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGtt > 2:338737‑M1/20‑101 (MQ=255) acactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTaaa < 2:354420‑M1/85‑1 (MQ=255) acactaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTaaa > 2:1119338‑M1/17‑101 (MQ=255) actaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaata > 1:503210‑M1/15‑101 (MQ=255) actaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaata > 2:1660780‑M1/15‑101 (MQ=255) ctaaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaataa > 1:857675‑M1/14‑101 (MQ=255) taaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaataat < 1:1514444‑M1/89‑1 (MQ=255) taaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAaataat < 2:197138‑M1/89‑1 (MQ=255) aaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAAtt > 1:1635365‑M1/12‑101 (MQ=255) aaatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAAtt > 2:1391378‑M1/12‑101 (MQ=255) aatcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTa < 1:1697722‑M1/91‑1 (MQ=255) aagcagcaagTTGGCAGCCTCACCTAATCTATCTTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTa > 2:297992‑M1/11‑101 (MQ=255) tcagtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTaaa > 2:1665613‑M1/9‑101 (MQ=255) agtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAata < 2:210575‑M1/95‑1 (MQ=255) agtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAata > 2:1400296‑M1/7‑101 (MQ=255) gtaagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAatat < 2:204903‑M1/96‑1 (MQ=255) taagTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATAtt > 1:952954‑M1/5‑101 (MQ=255) agTTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATATTCt > 1:794965‑M1/3‑101 (MQ=255) ttGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATATTCTaa < 1:435084/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGCAGCATCACCCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAATTAAATATTCTAA > 158/1‑101 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |