| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 152 | 6 = | 4 (0.060) | 34 (0.490) | 18/166 | 2.2 | 95.3% | intergenic (–/–) | –/– | –/– |
| ? | 65 | 18 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATTTCGCCCGTAGGCAGTCATTCAATAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGATT > 152/1‑105 | gacgcaggcaacggcacgctgacgcgcacacgtaagaaatcgttctggtggtatagaaaagtgattgccagtaatggtgaagatttagagtaagtaacagt < 2:740049‑M1/1‑1 (MQ=255)gacgcaggcaacggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagt < 2:1490333‑M1/1‑1 (MQ=255)gacgcaggcaacggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagt > 1:40621‑M1/101‑101 (MQ=255)gacgcaggcaacggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagt > 1:950991‑M1/101‑101 (MQ=255) acgcaggcaacggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTg > 2:1266100‑M1/100‑101 (MQ=255) acgcaggcaacggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTg > 1:378294‑M1/100‑101 (MQ=255) gcaggcaacggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGcc > 2:957342‑M1/98‑101 (MQ=255) aggcaacggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCgg < 1:1492562‑M1/6‑1 (MQ=255) gcaacggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGAt > 2:567353‑M1/94‑101 (MQ=255) gaacggcacgctggcgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATg > 2:1620201‑M1/93‑101 (MQ=255) cggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATgcgg > 1:1636649‑M1/90‑101 (MQ=255) cggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATgcgg > 2:992813‑M1/90‑101 (MQ=255) ggcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATgcggc < 1:1062782‑M1/13‑1 (MQ=255) gcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATgcggcg > 1:91997‑M1/88‑101 (MQ=255) gcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATgcggcg > 1:1697500‑M1/88‑101 (MQ=255) gcacgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATgcggcg > 2:1464563‑M1/88‑101 (MQ=255) cgctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGa < 2:692233‑M1/17‑1 (MQ=255) ctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAAc < 1:967863‑M1/19‑1 (MQ=255) ctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAAc > 2:1229746‑M1/83‑101 (MQ=255) ctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAAc > 2:1194049‑M1/83‑101 (MQ=255) ctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAAc > 1:690644‑M1/83‑101 (MQ=255) ctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAAc > 2:1381411‑M1/83‑101 (MQ=255) ctgacgcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagactaagtaacagTGCCGGATGCGGCGTGAAc > 1:1631814‑M1/83‑101 (MQ=255) gcgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCtt > 1:1431297‑M1/78‑101 (MQ=255) cgcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTa > 1:421713‑M1/77‑101 (MQ=255) gcacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTAt < 2:1659742‑M1/26‑1 (MQ=255) cacacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATc < 1:555290‑M1/27‑1 (MQ=255) acacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATcc > 1:602462‑M1/74‑101 (MQ=255) acacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATcc < 2:1176513‑M1/28‑1 (MQ=255) acacgtaagaaatcgttctggtggtataaaaaagggattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAGCGCCTTATcc < 2:493109‑M1/28‑1 (MQ=255) cacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCg > 2:1015449‑M1/73‑101 (MQ=255) cacgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCg > 1:1666027‑M1/73‑101 (MQ=255) acgtaagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCgg > 2:1233898‑M1/72‑101 (MQ=255) taagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt < 2:1395695‑M1/33‑1 (MQ=255) taagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt < 1:948765‑M1/33‑1 (MQ=255) aagaaatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa < 2:441529‑M1/34‑1 (MQ=255) aatcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGgcctagatg < 2:761732‑M1/38‑5 (MQ=255) atcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAcatgt < 2:452384‑M1/39‑3 (MQ=255) atcgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAcatgt < 1:183432‑M1/39‑3 (MQ=255) cgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCg > 1:145479‑M1/61‑101 (MQ=255) cgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCg > 2:1062777‑M1/61‑101 (MQ=255) cgttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCg < 2:599171‑M1/41‑1 (MQ=255) gttctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGc > 1:117711‑M1/60‑101 (MQ=255) tctggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTcgcac > 1:1452906‑M1/58‑99 (MQ=255) ggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAtgtcgcacgaa > 2:996484‑M1/55‑96 (MQ=255) ggtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAtgtcgcacgaa < 1:1716807‑M1/47‑6 (MQ=255) gtggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACatgtcgcacgaac < 1:434039‑M1/48‑7 (MQ=255) tggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAcatgtcgcacgaacc > 2:60954‑M1/53‑94 (MQ=255) ggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTacatgtcgcacgaacca < 2:684747‑M1/50‑9 (MQ=255) ggtataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTacatgtcgcacgaacca < 1:42455‑M1/50‑9 (MQ=255) tataaaaaagtgattgccagtaatggtgaagatttagagtaagtaacagTGCCGGATGCGGCGTGAACGCCTTATCCGGCctacatgtcgcacgaaccagg > 1:1601525‑M1/50‑91 (MQ=255) cacaCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATTTCGCCCGTAGGCAGTCATTCAATAGTTCTGATTACGCGGCTGGCAATGTATCAGt > 1:1685629/4‑101 (MQ=255) cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATTTCGCCCGTAGGCAGTCATTCAATAGTTCTGATTACGCGGCTGGCAATGTATCAGTcgcg > 2:664138/1‑101 (MQ=255) aCTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATTTCGCCCGTAGGCAGTCATTCAATAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGAt < 1:1324950/101‑1 (MQ=255) cTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATTTCGCCCGTAGGCAGTCATTCAATAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGAtt > 2:56291/1‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATTTCGCCCGTAGGCAGTCATTCAATAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGATT > 152/1‑105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |