| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 144 | 1 = | 0 (0.000) | 70 (0.050) | 53/168 | 0.0 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 222 | 17 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
Only 100 of 454 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAATGGGTGCAGTACAACTT‑‑GAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTCAAAATTCTTCGCCACCAGTCAGCACTGCCATAACTTGTCA > 144/1‑98 | atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 2:983866‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 2:943536‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 2:12167‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 2:1452095‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa > 2:1083349‑M1/101‑101 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 1:825503‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 1:735791‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 2:725705‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 1:449900‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa > 1:400204‑M1/101‑101 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 1:316748‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 1:24074‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 2:227760‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 1:161413‑M1/1‑1 (MQ=255)atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaa < 1:1540938‑M1/1‑1 (MQ=255) tcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaa > 1:129890‑M1/100‑101 (MQ=255) tcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaa < 1:473940‑M1/2‑1 (MQ=255) tcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaa < 2:1572468‑M1/2‑1 (MQ=255) tcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaa < 1:861172‑M1/2‑1 (MQ=255) catcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaa < 1:1150457‑M1/3‑1 (MQ=255) catcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaa < 2:247648‑M1/3‑1 (MQ=255) catcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaa > 1:495302‑M1/99‑101 (MQ=255) catcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaa < 2:172432‑M1/3‑1 (MQ=255) catcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaa > 2:582489‑M1/99‑101 (MQ=255) catcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaa < 1:429284‑M1/3‑1 (MQ=255) catcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaa < 2:1144773‑M1/3‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcacaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt > 2:1063096‑M1/98‑101 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt > 1:60704‑M1/98‑101 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt > 1:1313337‑M1/98‑101 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt < 1:1086169‑M1/4‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt < 1:1713962‑M1/4‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt < 1:341151‑M1/4‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt > 2:431899‑M1/98‑101 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt < 2:1185626‑M1/4‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt < 1:1670500‑M1/4‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt > 2:1177056‑M1/98‑101 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt > 1:1406645‑M1/98‑101 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt > 2:823850‑M1/98‑101 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt < 1:654511‑M1/4‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt > 1:579300‑M1/98‑101 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAAt > 2:103245‑M1/98‑101 (MQ=255) tcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATg < 1:805989‑M1/5‑1 (MQ=255) tcagtcgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATg > 2:358252‑M1/97‑101 (MQ=255) cagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATgg > 1:938051‑M1/96‑101 (MQ=255) cagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATgg > 1:1130278‑M1/96‑101 (MQ=255) agttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATggg < 1:793938‑M1/7‑1 (MQ=255) agttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATggg > 1:1628315‑M1/95‑101 (MQ=255) agttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATggg < 1:1349385‑M1/7‑1 (MQ=255) agttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATggg < 2:1640406‑M1/7‑1 (MQ=255) agttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATggg < 2:1542802‑M1/7‑1 (MQ=255) agttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATggg < 2:1253293‑M1/7‑1 (MQ=255) agttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATggg > 2:851401‑M1/95‑101 (MQ=255) gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGt < 2:1293156‑M1/8‑1 (MQ=255) gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGt > 1:529942‑M1/94‑101 (MQ=255) gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGt < 2:391449‑M1/8‑1 (MQ=255) ttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTg < 2:1677886‑M1/9‑1 (MQ=255) ttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTg > 1:1341680‑M1/93‑101 (MQ=255) ttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTg > 2:299162‑M1/93‑101 (MQ=255) ttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTg > 1:99623‑M1/93‑101 (MQ=255) tgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGc < 2:136374‑M1/10‑1 (MQ=255) tgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGc < 1:68100‑M1/10‑1 (MQ=255) tgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGc > 1:1460461‑M1/92‑101 (MQ=255) tgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGc > 2:161847‑M1/92‑101 (MQ=255) gtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCa > 1:187331‑M1/91‑101 (MQ=255) tgaagtagttattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg > 2:1664684‑M1/90‑101 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg > 2:1311249‑M1/90‑101 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg < 2:1404654‑M1/12‑1 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg > 2:878860‑M1/90‑101 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg > 2:781971‑M1/90‑101 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg > 1:90694‑M1/90‑101 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg < 1:1010215‑M1/12‑1 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg > 2:327879‑M1/90‑101 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg > 1:1571810‑M1/90‑101 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg > 1:512978‑M1/90‑101 (MQ=255) tgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAg > 1:1584595‑M1/90‑101 (MQ=255) tgaagtagtgattcacgacttcaagacgcttttcaaaaggggattttggctttgacatattaggggctattccatttcatcgtccaacaaaatggagatcg < 2:112684‑M1/12‑7 (MQ=255) gaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGt < 1:1235779‑M1/13‑1 (MQ=255) gaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGt < 1:1201525‑M1/13‑1 (MQ=255) gaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGt > 1:139215‑M1/89‑101 (MQ=255) aagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTa > 2:502554‑M1/88‑101 (MQ=255) aagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTa > 1:1442802‑M1/88‑101 (MQ=255) aagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTa > 2:59846‑M1/88‑101 (MQ=255) gtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACt > 2:277280‑M1/83‑101 (MQ=255) tgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACtt > 1:1090597‑M1/82‑101 (MQ=255) gattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACTT‑‑g > 1:211017‑M1/81‑101 (MQ=255) tcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTAcaacttttga > 1:1025884‑M1/78‑97 (MQ=255) cacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTacaacttttgaa < 2:67262‑M1/25‑6 (MQ=255) acgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGtacaacttttgaag > 2:918434‑M1/76‑95 (MQ=255) gcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGtt < 1:1278006‑M1/37‑1 (MQ=255) tcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCt < 1:111760‑M1/44‑1 (MQ=255) aaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCTGc > 2:544281‑M1/56‑101 (MQ=255) gctttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTc > 2:752190‑M1/42‑101 (MQ=255) tttgacatattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTCaa > 2:1491358‑M1/40‑101 (MQ=255) atattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTCAAAAttct < 1:706575‑M1/68‑1 (MQ=255) tattaggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTCAAAAttctt < 1:265244‑M1/69‑1 (MQ=255) taggggctattccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTCAAAATTCTTCGc > 2:1200857‑M1/30‑101 (MQ=255) tattccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTCAAAATTCTTCGCCACCAGt > 1:755916‑M1/23‑101 (MQ=255) tccatttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTCAAAATTCTTCGCCACCAGTCAg > 2:64776‑M1/20‑101 (MQ=255) atttcatcgtccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTATTTTCTGCATGACTCAATCGTCAAAATTCTTCGCCACCAGTCAGcat < 1:1689166‑M1/85‑2 (MQ=255) tccaacaAAATGGGTGCAGTACAACTTTTGAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTCAAAATTCTTCGCCACCAGTCAGCACTGCCATAAc > 2:480836‑M1/8‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAATGGGTGCAGTACAACTT‑‑GAAGCTGAACCCGTTTTTTTCTGCATGACTCAATCGTCAAAATTCTTCGCCACCAGTCAGCACTGCCATAACTTGTCA > 144/1‑98 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |