| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 141 | 1 = | 0 (0.000) | 41 (0.770) +GCGCATCTTATCCGGCCTACG |
30/158 | 1.1 | 67.0% | intergenic (–/–) | –/– | –/– |
| ? | 141 | = 92 | 51 (0.760) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCGACACCACCAGGCTT > 141/1‑101 | aaaacgtgccattaatgtcggatgcggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATg < 1:556833‑M1/20‑1 (MQ=255) aacgtgccattaatgtcggatgcggcgtgaacgccttatccgacctacgtttggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATgcg < 2:259914‑M1/22‑1 (MQ=255) cgtgccattaatgtcggatgcggcgtgaacgccttatccgacctacgttcgccacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGca > 2:178790‑M1/78‑101 (MQ=255) taatgtcggatgcggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTaa > 2:95957‑M1/70‑101 (MQ=255) taatgtcggatgcggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTaa > 1:952536‑M1/70‑101 (MQ=255) taatgtcggatgcggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTaa > 2:582614‑M1/70‑101 (MQ=255) atgtcggatgcggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACa < 1:416074‑M1/34‑1 (MQ=255) cggatgcggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAAtg > 2:1624603‑M1/64‑101 (MQ=255) tgcggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGcc > 1:1290720‑M1/60‑101 (MQ=255) gcggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCa > 2:502617‑M1/59‑101 (MQ=255) ggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCAtt < 2:1124775‑M1/45‑1 (MQ=255) ggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCAtt > 2:581712‑M1/57‑101 (MQ=255) ggcgtgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCAtt < 2:173897‑M1/45‑1 (MQ=255) cgtgaacgccttatccgacctacgttcggcccccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCa > 2:1319791‑M1/55‑101 (MQ=255) tgaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATg < 1:1435419‑M1/49‑1 (MQ=255) gaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGt < 2:1267358‑M1/50‑1 (MQ=255) gaacgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGt < 1:1159026‑M1/50‑1 (MQ=255) actccttatccgccctacgttcggctcccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCa > 2:709911‑M1/50‑101 (MQ=255) acgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCa > 2:421277‑M1/50‑101 (MQ=255) cgccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAg > 2:556828‑M1/49‑101 (MQ=255) gccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGGAACAAATGTGCCATTCATGTCAGa < 2:156583‑M1/54‑1 (MQ=255) ccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGAt < 1:492757‑M1/55‑1 (MQ=255) ccttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGAt > 2:737259‑M1/47‑101 (MQ=255) cttatccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATg > 1:658511‑M1/46‑101 (MQ=255) atccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATgcgg < 1:1434271‑M1/59‑1 (MQ=255) atccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATgcgg < 1:1494271‑M1/59‑1 (MQ=255) tccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATgcggc > 1:518375‑M1/42‑101 (MQ=255) tccgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATgcggc > 1:1251736‑M1/42‑101 (MQ=255) cgacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGt > 2:491043‑M1/40‑101 (MQ=255) gacctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTg < 2:474346‑M1/63‑1 (MQ=255) cctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGaa < 2:417791‑M1/65‑1 (MQ=255) cctacgtgcggcaccagtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGaa > 2:477205‑M1/37‑101 (MQ=255) ctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAAc > 1:1079159‑M1/36‑101 (MQ=255) ctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAAc > 2:512475‑M1/36‑101 (MQ=255) ctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAAc < 1:813875‑M1/66‑1 (MQ=255) ctacgttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAAc > 1:250113‑M1/36‑101 (MQ=255) gttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCt < 2:455106‑M1/70‑1 (MQ=255) ttcggcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCtt > 1:302516‑M1/31‑101 (MQ=255) gcacccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCt < 1:252886‑M1/75‑1 (MQ=255) cccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGAc < 1:51815‑M1/78‑1 (MQ=255) ccgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGAcc > 2:1221402‑M1/23‑101 (MQ=255) cgtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCt > 1:444989‑M1/22‑101 (MQ=255) gtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTa < 2:1620103‑M1/81‑1 (MQ=255) gtaggccggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTa > 2:897341‑M1/21‑101 (MQ=255) cggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCg < 1:10869‑M1/87‑1 (MQ=255) cggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCg > 1:97135‑M1/15‑101 (MQ=255) cggataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCg < 1:736155‑M1/87‑1 (MQ=255) ataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCGaca > 2:1494265‑M1/12‑101 (MQ=255) ataagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCGaca < 1:372307‑M1/90‑1 (MQ=255) taagatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCGacac > 1:639093‑M1/11‑101 (MQ=255) agatgcgcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCGAcacca < 2:1021083‑M1/93‑1 (MQ=255) gcCAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCGACACCACCAGGc < 1:323112‑M1/99‑1 (MQ=255) cAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCGACACCACCAGGCtt > 2:705412/1‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGCATCGCATCCGGCAATGCGCACAAGGTAACAAATGTGCCATTCATGTCAGATGCGGCGTGAACGCCTTATCTGACCTACGTTCGACACCACCAGGCTT > 141/1‑101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |