New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 13 | 11 = | 0 (0.000) | 61 (1.000) | 45/184 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
? | 156 | = 9517 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGTACATTGCGGCGGGGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCGCAGACGCCAGCCCC > 13/1‑111 | atttgcaaaccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccttcaagcaccac > 2:777348‑M1/101‑101 (MQ=255) atttgcaaaccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccac < 1:234078‑M1/1‑1 (MQ=255) tttgcaaaccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccacg < 2:23491‑M1/2‑1 (MQ=255) caaaccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccacggcgg < 2:387327‑M1/6‑1 (MQ=255) aaccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccacggcggtg < 2:1247422‑M1/8‑3 (MQ=255) ccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGAt > 2:908648‑M1/92‑101 (MQ=255) ccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGAt < 1:1007151‑M1/10‑1 (MQ=255) ccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGAt > 1:23491‑M1/92‑101 (MQ=255) ccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGAt < 2:489874‑M1/10‑1 (MQ=255) ccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGAt > 1:1623410‑M1/92‑101 (MQ=255) ccttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGAt < 1:257603‑M1/10‑1 (MQ=255) cttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATg > 2:1109779‑M1/91‑101 (MQ=255) ttgttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATgg < 2:55752‑M1/12‑1 (MQ=255) ttgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGtgatgtgac > 2:679403‑M1/87‑97 (MQ=255) tgcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCggg > 2:257603‑M1/86‑101 (MQ=255) agcaaatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCggg > 2:1352719‑M1/86‑101 (MQ=255) aatatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATc < 2:297371‑M1/20‑1 (MQ=255) atatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCa < 1:1118561‑M1/21‑1 (MQ=255) tatcccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAg > 1:107164‑M1/80‑101 (MQ=255) ccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAac < 2:73061‑M1/26‑1 (MQ=255) ccactaataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAac > 1:1033345‑M1/76‑101 (MQ=255) ctaataaaaccgcaatggcggtgccgataatggagccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAacgac > 1:814219‑M1/73‑101 (MQ=255) taataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAacgacg < 1:496798‑M1/30‑1 (MQ=255) aataaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGc < 2:28767‑M1/31‑1 (MQ=255) taaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGAcgcgc < 1:841890‑M1/33‑3 (MQ=255) taaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCAc > 1:891622‑M1/69‑101 (MQ=255) aaaaccgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCAcc < 1:1656257‑M1/34‑1 (MQ=255) cgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGAt < 2:1296217‑M1/39‑1 (MQ=255) cgcaatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGGGATGGCGGGCATCAGAAACGACGCACcgagaa < 2:717859‑M1/39‑2 (MQ=255) caatggcggtgccgataatggaaccggaatcaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCg < 2:1517893‑M1/41‑1 (MQ=255) caatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCg < 2:648321‑M1/41‑1 (MQ=255) caatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCg > 1:360954‑M1/61‑101 (MQ=255) aatggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCgg > 2:709051‑M1/60‑101 (MQ=255) atggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGa > 2:51181‑M1/59‑101 (MQ=255) ggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAAc > 2:1566590‑M1/57‑101 (MQ=255) ggcggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAAc > 1:387332‑M1/57‑101 (MQ=255) ggaggtgccgaaaatggagccggaaccaacataaatattcgcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAAc > 2:819413‑M1/57‑101 (MQ=255) ggtgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTg > 1:1439174‑M1/54‑101 (MQ=255) tgccgataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCt < 1:591396‑M1/50‑1 (MQ=255) gataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAAc < 1:96677‑M1/54‑1 (MQ=255) ataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAAcc < 2:1269500‑M1/55‑1 (MQ=255) ataatggaaccggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAAcc > 2:234078‑M1/47‑101 (MQ=255) accggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACg > 2:1007146‑M1/39‑101 (MQ=255) accggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACg < 2:815703‑M1/63‑1 (MQ=255) cggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGAt < 1:1505792‑M1/65‑1 (MQ=255) cggaaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGAt > 1:608097‑M1/37‑101 (MQ=255) aaccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATAcc < 2:1066820‑M1/68‑1 (MQ=255) accaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACca > 1:1377869‑M1/33‑101 (MQ=255) accaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACca > 2:464079‑M1/33‑101 (MQ=255) ccaccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACcag > 2:121456‑M1/32‑101 (MQ=255) ccataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACcagcag < 1:1250369‑M1/73‑1 (MQ=255) cataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCagcagc < 1:27479‑M1/74‑1 (MQ=255) cataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCagcagc > 1:297371‑M1/28‑101 (MQ=255) ataaatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAgcagca < 2:1419348‑M1/75‑1 (MQ=255) aatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAg > 2:1109404‑M1/24‑101 (MQ=255) aatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAg > 1:509860‑M1/24‑101 (MQ=255) aatattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAg > 2:1656251‑M1/24‑101 (MQ=255) tattggcaccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAgcg < 2:1175551‑M1/80‑1 (MQ=255) caccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGAcc > 2:74956‑M1/16‑101 (MQ=255) accgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCg < 2:1336270‑M1/87‑1 (MQ=255) accgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCg > 1:57914‑M1/15‑101 (MQ=255) ccgccaagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCGc > 1:1269505‑M1/14‑101 (MQ=255) caagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCGCAGAc > 2:962226‑M1/10‑101 (MQ=255) aagcaccaCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCGCAGACg < 1:468009‑M1/93‑1 (MQ=255) caCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCGCAGACGCCAGcc < 1:318221‑M1/99‑1 (MQ=255) caCGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCGCAGACGCCAGcc < 2:946330‑M1/99‑1 (MQ=255) CGGCGGTGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCGCAGACGCCAGcccc > 2:193089‑M1/1‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGTACATTGCGGCGGGGATGGCGGGCATCAGAAACGACGCACCGAGATCGGAACGTGCTGAACCAAAATACGATACCAGCAGCACAGCGGCGACCGCAGACGCCAGCCCC > 13/1‑111 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |