New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 119 1 =0 (0.000)28 (0.510) 16/188 2.7 50.0% intergenic (–/–) –/– –/–
?91 = 8419 56 (0.970)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAGGAGTCTGGTCGTCATAGTGTCACTA  >  119/1‑94
                                                                |                                                                                             
gaggatggtgcaatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAg                                                           >  2:1158530‑M1/65‑101 (MQ=255)
gaggatggtgcaatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAg                                                           <  1:283861‑M1/37‑1 (MQ=255)
   gatggtgcaatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAg                                                        >  1:954302‑M1/62‑101 (MQ=255)
     tggtgcaatatattgaatttaagcgattttgtaggccggataagggttccacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCt                                                      >  2:1093380‑M1/60‑101 (MQ=255)
       gtgcaatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCa                                                    <  2:1404199‑M1/44‑1 (MQ=255)
       gtgcaatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCa                                                    >  1:1181892‑M1/58‑101 (MQ=255)
        tgcaatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCaa                                                   <  1:1432110‑M1/45‑1 (MQ=255)
         gcaatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAGCAAACTGAGTAGCTCAAg                                                  >  1:1449413‑M1/56‑101 (MQ=255)
         gcaatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAg                                                  >  2:1047781‑M1/56‑101 (MQ=255)
           aatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGa                                                <  2:857298‑M1/48‑1 (MQ=255)
           aatatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGa                                                <  2:574519‑M1/48‑1 (MQ=255)
            atatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGaa                                               <  2:1535637‑M1/49‑1 (MQ=255)
             tatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGaaa                                              >  2:825227‑M1/52‑101 (MQ=255)
             tatattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGaaa                                              <  1:1064897‑M1/50‑1 (MQ=255)
              atattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAAt                                             >  1:1056476‑M1/51‑101 (MQ=255)
               tattgaatttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATc                                            >  1:1545062‑M1/50‑101 (MQ=255)
                     atttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATg                                      <  1:1549966‑M1/58‑1 (MQ=255)
                       ttaagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGaa                                    >  2:1570431‑M1/42‑101 (MQ=255)
                        taagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAg                                   >  1:323706‑M1/41‑101 (MQ=255)
                         aagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGa                                  <  1:78389‑M1/62‑1 (MQ=255)
                         aagcgattttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGa                                  >  1:1405161‑M1/40‑101 (MQ=255)
                               ttttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACa                            >  1:772363‑M1/34‑101 (MQ=255)
                               ttttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACa                            <  1:461715‑M1/68‑1 (MQ=255)
                                tttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAg                           <  2:650367‑M1/69‑1 (MQ=255)
                                tttgtaggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAg                           <  1:1445568‑M1/69‑1 (MQ=255)
                                    taggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAGGAGt                       >  2:311990‑M1/29‑101 (MQ=255)
                                    taggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAGGAGt                       >  1:574524‑M1/29‑101 (MQ=255)
                                     aggccggataaggcgttcacgccgcatCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAGGAGTc                      <  1:1563139‑M1/74‑1 (MQ=255)
                                                         gccgcatccGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAGGAGTCTGGTCGTCATAGTGTCACTa  <  1:857303/94‑1 (MQ=255)
                                                                |                                                                                             
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAATGAAGACCAACAGGAGTCTGGTCGTCATAGTGTCACTA  >  119/1‑94

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.