New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 117 = 143610 (0.000)55 (1.240)
+TGCCGGATGCGGCGTGAACGCCTTATC
38/146 0.1 100% intergenic (–/–) –/– –/–
?28 = 36827 0 (0.000)intergenic (–/–) –/– –/–

GGGGCGTATACCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  117/14261‑14361
                                                                                                    |                                                                                                    
ggggCGTATACCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCa                                                                                                      >  2:483415/1‑101 (MQ=255)
 gggCGTATACCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAt                                                                                                     <  2:469776‑M1/101‑2 (MQ=255)
 gggCGTATACCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAt                                                                                                     <  2:548338‑M1/101‑2 (MQ=255)
     gTATACCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccg                                                                                                 >  2:1381787‑M1/1‑96 (MQ=255)
     gTATACCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccg                                                                                                 >  1:286811‑M1/1‑96 (MQ=255)
       ataCCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccgga                                                                                               >  2:583326‑M1/1‑94 (MQ=255)
        taCCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggat                                                                                              >  2:1469342‑M1/1‑93 (MQ=255)
           cTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcg                                                                                           >  1:1503672‑M1/1‑90 (MQ=255)
               aaCGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgt                                                                                       <  1:559230‑M1/101‑16 (MQ=255)
               aaCGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgt                                                                                       <  1:1213785‑M1/101‑16 (MQ=255)
                aCGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtg                                                                                      <  1:219877‑M1/101‑17 (MQ=255)
                aCGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtg                                                                                      <  1:160668‑M1/101‑17 (MQ=255)
                   aGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaac                                                                                   <  2:207698‑M1/101‑20 (MQ=255)
                          acgtacgtGGTATATGAGCGTAAACACCCACTTCTGATGCTAACCTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttat                                                                            <  2:560324‑M1/101‑27 (MQ=255)
                           cgtacgtGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatc                                                                           >  1:1050779‑M1/1‑74 (MQ=255)
                            gtacgtGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatcc                                                                          <  1:635072‑M1/101‑29 (MQ=255)
                            gtacgtGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatcc                                                                          >  2:280236‑M1/1‑73 (MQ=255)
                            gtacgtGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatcc                                                                          >  1:1337811‑M1/1‑73 (MQ=255)
                              acgtGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccgg                                                                        >  2:681345‑M1/1‑71 (MQ=255)
                               cgtGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggc                                                                       >  2:807062‑M1/1‑70 (MQ=255)
                                  ggTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggccta                                                                    >  1:1154211‑M1/1‑67 (MQ=255)
                                   gTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctac                                                                   <  2:310681‑M1/101‑36 (MQ=255)
                                    tataTGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctaca                                                                  <  1:1261482‑M1/101‑37 (MQ=255)
                                     atatGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaa                                                                 >  2:1178220‑M1/1‑64 (MQ=255)
                                     atatGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaa                                                                 >  1:1172015‑M1/1‑64 (MQ=255)
                                             gTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttg                                                         >  2:161395‑M1/1‑56 (MQ=255)
                                              tAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgc                                                        >  2:517501‑M1/1‑55 (MQ=255)
                                              tAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgc                                                        <  2:1177881‑M1/101‑47 (MQ=255)
                                                aaCACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgcca                                                      <  1:1624691‑M1/101‑49 (MQ=255)
                                                    cccACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattc                                                  >  2:717184‑M1/1‑49 (MQ=255)
                                                      cACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaa                                                <  1:1168697‑M1/101‑55 (MQ=255)
                                                        cTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaata                                              >  2:1622644‑M1/1‑45 (MQ=255)
                                                        cTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaata                                              >  1:845837‑M1/1‑45 (MQ=255)
                                                          tCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatata                                            >  1:839436‑M1/1‑43 (MQ=255)
                                                            tGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatatt                                          <  1:1636176‑M1/101‑61 (MQ=255)
                                                             gATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattg                                         >  1:1641933‑M1/1‑40 (MQ=255)
                                                              aTGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgc                                        >  2:999362‑M1/1‑39 (MQ=255)
                                                                 cTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcagg                                     <  1:93412‑M1/101‑66 (MQ=255)
                                                                  tAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcagga                                    <  2:1120461‑M1/101‑67 (MQ=255)
                                                                  tAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcagga                                    >  1:1560550‑M1/1‑35 (MQ=255)
                                                                  tAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcagga                                    >  1:34899‑M1/1‑35 (MQ=255)
                                                                   aaCGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggac                                   <  2:215678‑M1/101‑68 (MQ=255)
                                                                     cGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggacca                                 <  1:999986‑M1/101‑70 (MQ=255)
                                                                     cGTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggacca                                 >  1:434033‑M1/1‑32 (MQ=255)
                                                                      gTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccat                                >  2:880145‑M1/1‑31 (MQ=255)
                                                                      gTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccat                                >  1:1591935‑M1/1‑31 (MQ=255)
                                                                      gTCAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccat                                >  1:1718821‑M1/1‑31 (MQ=255)
                                                                        cAGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgt                              >  1:259808‑M1/1‑29 (MQ=255)
                                                                         aGATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgta                             <  2:1560544‑M1/101‑74 (MQ=255)
                                                                          gATTGTTGACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtag                            <  2:1703675‑M1/101‑75 (MQ=255)
                                                                            ttgttgACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggc                          <  2:1330721‑M1/101‑77 (MQ=255)
                                                                             tgttgACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcc                         <  2:271758‑M1/101‑78 (MQ=255)
                                                                                tgACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacaccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctga                      >  1:756952‑M1/1‑21 (MQ=255)
                                                                                 gACAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgat                     >  1:221826‑M1/1‑20 (MQ=255)
                                                                                   cAAAGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataa                   >  1:769934‑M1/1‑18 (MQ=255)
                                                                                    aaaGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataag                  <  1:583331‑M1/101‑85 (MQ=255)
                                                                                     aaGTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagc                 >  2:215615‑M1/1‑16 (MQ=255)
                                                                                       gTGCGCGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgt               <  2:525204‑M1/101‑88 (MQ=255)
                                                                                         gcgcGTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtag             <  2:394272‑M1/101‑90 (MQ=255)
                                                                                          cgcgTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtagc            <  1:483420‑M1/101‑91 (MQ=255)
                                                                                          cgcgTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtagc            >  1:505170‑M1/1‑11 (MQ=255)
                                                                                           gcgTCGTTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtagcg           <  1:1715238‑M1/101‑92 (MQ=255)
                                                                                              tcgtTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtagcgcat        <  2:1081866‑M1/101‑95 (MQ=255)
                                                                                              tcgtTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtagcgcat        <  2:1050774‑M1/101‑95 (MQ=255)
                                                                                                gtTCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcatagcgcatca      <  1:858175‑M1/101‑97 (MQ=255)
                                                                                                  tCAtgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtagcgcatcagg    <  1:79016‑M1/101‑99 (MQ=255)
                                                                                                   cAtgccggatgcggcgtgaacgccttatccggcctacaaatccttgcgaattcaatatattgtatggaaattcaggcctgataagcgtagcgcatcaggct   >  1:1044999‑M1/1‑2 (MQ=255)
                                                                                                    atgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtagcgcatcaggca  >  2:1586640‑M1/1‑1 (MQ=255)
                                                                                                    atgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtagcgcatcaggca  <  2:915584‑M1/101‑101 (MQ=255)
                                                                                                    atgccggatgcggcgtgaacgccttatccggcctacaaaaatcttgccaattcaatatattgcaggaccatgtaggcctgataagcgtagcgcatcagaga  >  2:242452‑M1/1‑1 (MQ=255)
                                                                                                    |                                                                                                    
GGGGCGTATACCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGATGCTAACGTCAGATTGTTGACAAAGTGCGCGTCGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  117/14261‑14361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.