| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 114 | 12107 = | 60 (0.800) | 28 (0.610) +GGAGCACGAATGTAGGCCGGATAAGGCGTTTA |
20/136 | 1.4 | 57.9% | intergenic (–/–) | –/– | –/– |
| ? | 129 | = 13398 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
ATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTACACGACACACATTTC > 114/12007‑12207 | aTCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTtcgactcgac > 1:640730/1‑101 (MQ=255)aTCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTtcgactcgac < 1:74628/101‑1 (MQ=255) tCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACg > 1:869914/1‑101 (MQ=255) gcatgggtagatgatccattattagctcctgaaaaatttatgtagcgcatgactcccggatgcggcgtaaaagccttatccggcctccattcgtgctccCg > 2:1681644‑M1/100‑101 (MQ=255) aCCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTa > 2:1700202/1‑101 (MQ=255) tgggtagatgatccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAg > 2:970022‑M1/97‑101 (MQ=255) tgggtagatgatccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAg > 1:1333419‑M1/97‑101 (MQ=255) ccGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAg < 2:1649660/101‑1 (MQ=255) gggtagatgatccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAgg > 1:913274‑M1/96‑101 (MQ=255) ggtagatgatccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGc < 2:1706166‑M1/7‑1 (MQ=255) gtagatgatccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGcc < 1:680317‑M1/8‑1 (MQ=255) tagatgatccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCt < 2:1126662‑M1/9‑1 (MQ=255) cAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTg < 1:385658/101‑1 (MQ=255) cAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTg < 2:1369903/101‑1 (MQ=255) aaaTTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGa > 2:1376283/1‑101 (MQ=255) tgatccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATa < 1:1304281‑M1/13‑1 (MQ=255) atccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAg < 1:1495479‑M1/15‑1 (MQ=255) tccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGa < 1:1221733‑M1/16‑1 (MQ=255) gAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGAc < 1:837221/101‑1 (MQ=255) gAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGAc > 2:1104129/1‑101 (MQ=255) gAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGAc < 1:232159/101‑1 (MQ=255) ccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGAc < 2:1102379‑M1/17‑1 (MQ=255) ccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGAc > 1:1328408‑M1/85‑101 (MQ=255) ccattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGAc > 2:688900‑M1/85‑101 (MQ=255) cattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGAcg < 1:879995‑M1/18‑1 (MQ=255) cattattagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGAcg < 1:777709‑M1/18‑1 (MQ=255) aaaGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGAcgc > 2:1021591/1‑101 (MQ=255) aaGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGAcgcg > 2:105522/1‑101 (MQ=255) aGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGt < 1:516459/101‑1 (MQ=255) ttagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCa > 1:492599‑M1/79‑101 (MQ=255) tagctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAg > 2:1342351‑M1/78‑101 (MQ=255) tGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGc < 2:1348247/101‑1 (MQ=255) gCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCg > 2:1168415/1‑101 (MQ=255) ctcctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGt < 2:449582‑M1/27‑1 (MQ=255) cTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGCTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGt > 2:411293/1‑101 (MQ=255) cctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCg > 2:1325512‑M1/73‑101 (MQ=255) ctgaaaaatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGc < 1:1190066‑M1/30‑1 (MQ=255) aGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCa > 1:1341215/1‑101 (MQ=255) aGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCa > 1:497676/1‑101 (MQ=255) cAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAgg < 1:439815/101‑1 (MQ=255) aatttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAgg > 1:1506353‑M1/66‑101 (MQ=255) aGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGc > 1:1196373/1‑101 (MQ=255) aGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGc > 1:895381/1‑101 (MQ=255) aGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGc > 1:1429028/1‑101 (MQ=255) ttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGcag < 2:54462‑M1/39‑2 (MQ=255) ttatgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGcag > 1:1713299‑M1/63‑100 (MQ=255) gCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCaa > 2:1190745/1‑101 (MQ=255) atgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAggcagcg < 2:1076751‑M1/41‑4 (MQ=255) atgtagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAggcagcg < 2:1399958‑M1/41‑4 (MQ=255) tttttGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAAtg > 1:1312143/1‑101 (MQ=255) tagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCAtcaggcagcgcac > 2:680312‑M1/58‑95 (MQ=255) tagcgcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCAtcaggcagcgcac > 1:1059402‑M1/58‑95 (MQ=255) tGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGcc < 2:1299857/101‑1 (MQ=255) gcatgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTcgcatcaggcagcgcacggac < 1:1424975‑M1/48‑11 (MQ=255) aTCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGAATGTGCCGGc > 2:1054283/1‑101 (MQ=255) gCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCAtt > 2:428468/1‑101 (MQ=255) cAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTg < 2:640725/101‑1 (MQ=255) cAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTg < 1:396413/101‑1 (MQ=255) aGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGt < 2:616502/101‑1 (MQ=255) aGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGt > 1:1635189/1‑101 (MQ=255) cTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCg > 1:961328/1‑101 (MQ=255) cATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGa > 2:1233546/1‑101 (MQ=255) cATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGa > 2:1307238/1‑101 (MQ=255) cATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGa > 2:1389670/1‑101 (MQ=255) aTGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGAt < 2:1094381/101‑1 (MQ=255) tGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATg > 2:43432/1‑101 (MQ=255) aGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATgcg > 2:363121/1‑101 (MQ=255) gagaACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGcgcg > 1:1383813/1‑101 (MQ=255) agaACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGa > 2:1017909/1‑101 (MQ=255) gaACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGAc < 1:1414045/101‑1 (MQ=255) aaCCTCCGGGGGCAGGGAGGTTCGATTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGAcc < 2:1567433/101‑1 (MQ=255) ccTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGc > 2:881500/1‑101 (MQ=255) cGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTa > 1:249551/1‑101 (MQ=255) cAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGAc < 2:288515/101‑1 (MQ=255) cAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGAc > 2:1200768/1‑101 (MQ=255) aGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGAcc > 1:1063601/1‑101 (MQ=255) aGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGAcc < 2:487171/101‑1 (MQ=255) ggAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTa > 1:629115/1‑101 (MQ=255) ggAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTa > 2:371660/1‑101 (MQ=255) ggTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTacac < 1:1700208/101‑1 (MQ=255) ggTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTacac > 2:1369284/1‑101 (MQ=255) ttCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTACACGa < 2:497671/101‑1 (MQ=255) tcgactccacGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTACACGac < 2:768764/101‑1 (MQ=255) cgactcgacGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTACACGaca > 1:1621783/1‑101 (MQ=255) actcgacGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGGGGGGCGACCGCCTTATTCGACCTACACGacaca > 2:1114821/1‑101 (MQ=255) ctcgacGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTACACGacacac > 2:188464/1‑101 (MQ=255) ctcgacGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTACACGacacac > 2:1628686/1‑101 (MQ=255) cgacGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTACACGACACACAt > 1:1227010/1‑101 (MQ=255) cGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTACACGACACACATTTc > 2:1657031/1‑101 (MQ=255) | ATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGACTCGACGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAAATGTGCCGGCCATTGTCGGATGCGGCGCGACCGCCTTATTCGACCTACACGACACACATTTC > 114/12007‑12207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |