| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 112 | = 14615 | 0 (0.000) | 45 (0.940) +ATGGCTGTGGCTACAGCCACAGCGCCT |
35/146 | 0.4 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 171 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CGCAGACAATAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 112/14515‑14615 | cGCAGACAATAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCa > 1:271771/1‑101 (MQ=255) cAGACAATAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAat > 2:1575668‑M1/1‑99 (MQ=255) gACAATAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatgg > 1:1632745‑M1/1‑97 (MQ=255) gACAATAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatgg > 1:179748‑M1/1‑97 (MQ=255) cAATAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggct > 1:702310‑M1/1‑95 (MQ=255) cAATAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggct > 1:140956‑M1/1‑95 (MQ=255) cAATAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggct > 2:759414‑M1/1‑95 (MQ=255) aaTAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctt > 2:73756‑M1/1‑94 (MQ=255) aTAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgt > 1:251795‑M1/1‑93 (MQ=255) tAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtg > 2:380316‑M1/1‑92 (MQ=255) aaaTTTATAAGCGCAGTCCTGAGAAGCCGGATAATGTTCCAGGAAATGCCAGTGAAATTTTGCTCGAGAACGGCGTTCGTCGCCAGCTTCaatgtcagtgg > 1:210829/1‑91 (MQ=255) aaTTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggc > 2:1704147‑M1/1‑90 (MQ=255) tttATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggcta < 2:1021188‑M1/101‑14 (MQ=255) ttATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctac < 2:807514‑M1/101‑15 (MQ=255) tataAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctaca > 1:1348443‑M1/1‑86 (MQ=255) tataAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctaca > 1:551381‑M1/1‑86 (MQ=255) ataAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacag > 1:117790‑M1/1‑85 (MQ=255) ataAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggatgtggctacag > 2:945313‑M1/1‑85 (MQ=255) aaGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagcc > 2:889841‑M1/1‑83 (MQ=255) gcAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacag < 1:1202890‑M1/101‑23 (MQ=255) cAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagc > 2:846493‑M1/1‑78 (MQ=255) aGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccccagcg > 2:421968‑M1/1‑77 (MQ=255) aGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcg > 1:123200‑M1/1‑77 (MQ=255) tCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgcc < 2:463947‑M1/101‑27 (MQ=255) ccTGAGCAGCCGGATAATGTTCCAGGAACTTCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgcct < 1:1267387‑M1/101‑28 (MQ=255) cTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgcctt > 2:870592‑M1/1‑73 (MQ=255) cTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgcctt < 1:421973‑M1/101‑29 (MQ=255) cTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgcctt > 2:869968‑M1/1‑73 (MQ=255) cTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgcctt > 1:134895‑M1/1‑73 (MQ=255) gAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttct < 1:1601403‑M1/101‑31 (MQ=255) gcagcCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttc > 2:1582147‑M1/1‑69 (MQ=255) gcCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttccct < 1:1142508‑M1/101‑36 (MQ=255) gATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgtt > 1:287534‑M1/1‑62 (MQ=255) aTAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttg > 1:700399‑M1/1‑61 (MQ=255) aaTGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgcc > 1:1635392‑M1/1‑59 (MQ=255) aTGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgcca > 1:1551640‑M1/1‑58 (MQ=255) aTGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgcca < 1:1575674‑M1/101‑44 (MQ=255) tCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttc < 1:867221‑M1/101‑48 (MQ=255) gAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGACGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtccg > 1:1065037‑M1/1‑49 (MQ=255) cTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaa > 2:307311‑M1/1‑46 (MQ=255) tGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaat > 2:1275680‑M1/1‑45 (MQ=255) cAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagc > 1:1404936‑M1/1‑42 (MQ=255) cAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagc > 1:1364509‑M1/1‑42 (MQ=255) aGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcg > 2:353326‑M1/1‑41 (MQ=255) gTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcgg > 1:1427278‑M1/1‑40 (MQ=255) gTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcgg < 2:1542886‑M1/101‑62 (MQ=255) gTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcgg > 2:1643058‑M1/1‑40 (MQ=255) aaaTTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgc > 1:138977‑M1/1‑37 (MQ=255) gCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaa < 2:551376‑M1/101‑72 (MQ=255) gCTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttattgccagttcgtcaggaatagcggcgcaaataaa < 1:1532920‑M1/101‑72 (MQ=255) cTCGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaag < 1:936169‑M1/101‑73 (MQ=255) cGAGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagac < 1:1514558‑M1/101‑75 (MQ=255) ggcgcggcgTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactt < 1:1704153‑M1/97‑77 (MQ=255) aGCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagtctt < 2:526567‑M1/101‑77 (MQ=255) gCACGGCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagacttt < 1:759419‑M1/101‑78 (MQ=255) ggCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactc > 2:314189‑M1/1‑20 (MQ=255) ggCGTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactc < 2:271771‑M1/101‑82 (MQ=255) gTTCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcatt < 2:105363‑M1/101‑85 (MQ=255) ttCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattt < 2:413436‑M1/101‑86 (MQ=255) ttCGTCGCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattt < 1:1297264‑M1/101‑86 (MQ=255) gtcgCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgt < 1:1564085‑M1/101‑89 (MQ=255) cgCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgttt < 2:102344‑M1/101‑91 (MQ=255) cgCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgttt < 1:1192839‑M1/101‑91 (MQ=255) cgCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgttt < 1:846498‑M1/101‑91 (MQ=255) gCCAGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgtttt < 1:223907‑M1/101‑92 (MQ=255) aGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgttttaac > 2:748264‑M1/1‑7 (MQ=255) aGCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgttttaac > 1:328458‑M1/1‑7 (MQ=255) gCTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgttttaacc < 1:1541367‑M1/101‑96 (MQ=255) cTTCAatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgttttaacct < 1:889846‑M1/101‑97 (MQ=255) aatggctgtggctacagccacagcgccttcttcccttgttgccagttcgtcaggaatagcggcgcaaataaagactttactcattttgttttaacctcatg > 2:442231‑M1/1‑1 (MQ=255) | CGCAGACAATAAATTTATAAGCGCAGTCCTGAGCAGCCGGATAATGTTCCAGGAACTGCCAGTGAAATTTTGCTCGAGCACGGCGTTCGTCGCCAGCTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 112/14515‑14615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |