New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 110 = 152360 (0.000)43 (0.800)
+GCGTGAACGCCTTATCCGGCCTACA
37/150 0.5 100% intergenic (–/–) –/– –/–
?131 = 13095 0 (0.000)intergenic (–/–) –/– –/–

ATCATCGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  110/15137‑15236
                                                                                                   |                                                                                                 
atcatcGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGg                                                                                                  >  1:1545717‑M1/1‑100 (MQ=255)
   atcGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGGGTTGTGTCCGTTAGGTGCGGGTAATCAAATTTTTGCCGGATGAGgcgg                                                                                               >  1:402849‑M1/1‑97 (MQ=255)
     cGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtga                                                                                             >  2:28063‑M1/1‑95 (MQ=255)
       ccccGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaac                                                                                           <  2:982070‑M1/101‑9 (MQ=255)
        cccGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacg                                                                                          >  1:1530036‑M1/1‑92 (MQ=255)
         ccGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgc                                                                                         >  1:13060‑M1/1‑91 (MQ=255)
           gACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgcct                                                                                       <  2:756483‑M1/101‑13 (MQ=255)
                  tGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccgg                                                                                <  1:1587891‑M1/101‑20 (MQ=255)
                      aaGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggccta                                                                            >  1:884855‑M1/1‑78 (MQ=255)
                      aaGGACTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCTGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggccta                                                                            >  2:585764‑M1/1‑78 (MQ=255)
                       aGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctac                                                                           >  2:246643‑M1/1‑77 (MQ=255)
                        ggTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctaca                                                                          >  2:1343548‑M1/1‑76 (MQ=255)
                          tCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaac                                                                        <  2:556981‑M1/101‑28 (MQ=255)
                           cTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacg                                                                       >  1:395459‑M1/1‑73 (MQ=255)
                              tGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggc                                                                    <  1:299614‑M1/101‑32 (MQ=255)
                                 gcAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgcctcatccggcctacaacgggcaat                                                                 >  2:1203992‑M1/1‑67 (MQ=255)
                                  cAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaatt                                                                <  2:210728‑M1/101‑36 (MQ=255)
                                     agGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaatttta                                                             >  2:569185‑M1/1‑63 (MQ=255)
                                     agGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaatttta                                                             >  1:1477556‑M1/1‑63 (MQ=255)
                                      ggTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttac                                                            >  2:794845‑M1/1‑62 (MQ=255)
                                        tGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacgg                                                          >  1:814078‑M1/1‑60 (MQ=255)
                                         ggCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggc                                                         >  2:1667668‑M1/1‑59 (MQ=255)
                                           cAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggccc                                                       >  1:895231‑M1/1‑57 (MQ=255)
                                           cAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggccc                                                       >  2:1439733‑M1/1‑57 (MQ=255)
                                             gATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTTATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggccccc                                                     >  2:347545‑M1/1‑55 (MQ=255)
                                              aTTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccg                                                    >  1:70370‑M1/1‑54 (MQ=255)
                                                ttCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgtt                                                  <  1:1076987‑M1/101‑50 (MQ=255)
                                                    tGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatc                                              >  1:452314‑M1/1‑48 (MQ=255)
                                                     ggTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatct                                             <  2:46086‑M1/101‑55 (MQ=255)
                                                     ggTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatct                                             <  1:755030‑M1/101‑55 (MQ=255)
                                                         ttgtGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaa                                         >  2:988060‑M1/1‑43 (MQ=255)
                                                          tgtgTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaac                                        >  1:530562‑M1/1‑42 (MQ=255)
                                                            tgtCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaacta                                      <  1:868066‑M1/101‑62 (MQ=255)
                                                             gtCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactat                                     >  1:1487237‑M1/1‑39 (MQ=255)
                                                              tCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactata                                    >  2:421691‑M1/1‑38 (MQ=255)
                                                               ccGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactatac                                   <  1:1362549‑M1/101‑65 (MQ=255)
                                                                cGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactatacc                                  <  1:306229‑M1/101‑66 (MQ=255)
                                                                 gTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactatacca                                 <  1:1255395‑M1/101‑67 (MQ=255)
                                                                    aGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccatta                              <  1:336991‑M1/101‑70 (MQ=255)
                                                                    aGGTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccatta                              <  1:920742‑M1/101‑70 (MQ=255)
                                                                      gTGCGGTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagc                            >  1:831192‑M1/1‑30 (MQ=255)
                                                                       tGCGGTTAATCAAATTTTTGCCGGATGCGgcatgaacgccttatcaggcctataacggtcacttttacggcccccgttaatctcagactataccattagcc                           >  2:1403690‑M1/1‑29 (MQ=255)
                                                                          ggTTAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactg                        <  1:246643‑M1/101‑76 (MQ=255)
                                                                            ttAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactgga                      <  2:814073‑M1/101‑78 (MQ=255)
                                                                            ttAATCAAATTTTGGGCGGATGCGgcgtgaacgccttatccggccttcaacgggcaattttacggcccccgttaatctcaaactataccattagcactgga                      <  1:1024169‑M1/101‑78 (MQ=255)
                                                                             tAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactggaa                     >  1:1192893‑M1/1‑23 (MQ=255)
                                                                             tAATCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattaacacaggaa                     >  1:244023‑M1/1‑23 (MQ=255)
                                                                                tCAAATTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactggaagtt                  <  1:794850‑M1/101‑82 (MQ=255)
                                                                                  aaaTTTTTGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactggaagttgg                <  1:131955‑M1/101‑84 (MQ=255)
                                                                                     tttttGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactggaagttggcac             <  1:325999‑M1/101‑87 (MQ=255)
                                                                                         tGCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactggaagttggcacgtac         <  2:1530030‑M1/101‑91 (MQ=255)
                                                                                          gCCGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactggaagttggcacgtaca        <  1:1243431‑M1/101‑92 (MQ=255)
                                                                                            cGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactggaagttggcacgtacagg      <  2:1240296‑M1/101‑94 (MQ=255)
                                                                                            cGGATGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactggaagttggcacgtacagg      >  2:640770‑M1/1‑8 (MQ=255)
                                                                                                tGCGgcgtgaacgccttatccggcctacaacgggcaattttacggcccccgttaatctcaaactataccattagcactggaagttggcacgtacaggtggg  <  2:283025‑M1/101‑98 (MQ=255)
                                                                                                   |                                                                                                 
ATCATCGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  110/15137‑15236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.