New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	11	= 54219	0 (0.000)	25 (0.460)	17/200	1.4	60.2%	intergenic (–/–)	–/–	–/–
	?	51	= 15503	33 (0.740)					intergenic (–/–)	–/–	–/–

GAAGAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  11/54119‑54219                                                                                                     |                                              gAAGAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTAt                                               <  1:1160461/101‑1 (MQ=255)         cgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggat                                       >  1:1192741‑M1/1‑93 (MQ=255)         cgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggat                                       <  2:527682‑M1/101‑9 (MQ=255)         cgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggat                                       <  2:49918‑M1/101‑9 (MQ=255)            gaTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcg                                    <  1:513407‑M1/101‑12 (MQ=255)              ttATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgat                                  <  2:1119647‑M1/101‑14 (MQ=255)               tATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatg                                 <  2:1198086‑M1/101‑15 (MQ=255)                 tCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgct                               >  2:1405466‑M1/1‑85 (MQ=255)                          gTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatct                      <  2:1629243‑M1/101‑26 (MQ=255)                            aGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgattcttgcgcatctta                    <  2:948002‑M1/101‑28 (MQ=255)                            aGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatctta                    >  1:1601692‑M1/1‑74 (MQ=255)                            aGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatctta                    <  2:456973‑M1/101‑28 (MQ=255)                             gTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttat                   <  1:1462222‑M1/101‑29 (MQ=255)                                  aTTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgac              <  1:1414500‑M1/101‑34 (MQ=255)                                  aTTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgac              >  2:92568‑M1/1‑68 (MQ=255)                                  aTTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgac              >  1:259688‑M1/1‑68 (MQ=255)                                   ttAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacc             >  1:331496‑M1/1‑67 (MQ=255)                                    tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacct            >  1:1396518‑M1/1‑66 (MQ=255)                                    tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacat            >  1:1339888‑M1/1‑66 (MQ=255)                                       cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacctaca         >  2:279171‑M1/1‑63 (MQ=255)                                       cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacctaca         <  2:350295‑M1/101‑39 (MQ=255)                                        ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacctacaa        >  1:1499826‑M1/1‑62 (MQ=255)                                          cAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacctacaaat      <  2:903731‑M1/101‑42 (MQ=255)                                            aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacctacaaatcg    <  2:54928‑M1/101‑44 (MQ=255)                                             tAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgc   >  2:1275265‑M1/1‑57 (MQ=255)                                              aaaaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATtgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgca  >  1:318774‑M1/1‑56 (MQ=255)                                                                                                     |                                              GAAGAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  11/54119‑54219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.