New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 103 | 1 = | 0 (0.000) | 49 (1.010) | 41/164 | 0.1 | 70.0% | intergenic (–/–) | –/– | –/– |
? | 115 | = 9563 | 42 (0.750) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTCGCGTCCTTCACCCCC > 103/1‑101 | gcatttgcatcaggcatcagtgcacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaa < 1:1659851‑M1/1‑1 (MQ=255) atcaggcatcagtgcacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCa < 2:821665‑M1/9‑1 (MQ=255) caggcatcagtgcacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATc < 2:153921‑M1/11‑1 (MQ=255) atcagtgcacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCa < 1:528629‑M1/16‑1 (MQ=255) atcagtgcacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCa < 1:1295661‑M1/16‑1 (MQ=255) tcagtgcacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCAt > 2:244284‑M1/85‑101 (MQ=255) agtgcacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCt > 2:508375‑M1/83‑101 (MQ=255) gcacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTgcg < 2:1630428‑M1/22‑1 (MQ=255) gcacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTgcg < 2:937193‑M1/22‑1 (MQ=255) cacgatcgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTgcgc < 2:1447318‑M1/23‑1 (MQ=255) cgccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAAt > 1:1647897‑M1/73‑101 (MQ=255) cgccagatgcggcatgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAAt > 1:205947‑M1/73‑101 (MQ=255) gccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATg > 1:672832‑M1/72‑101 (MQ=255) gccggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATg > 1:1277955‑M1/72‑101 (MQ=255) ggatgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCt < 1:1369097‑M1/33‑1 (MQ=255) atgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTa > 1:767278‑M1/67‑101 (MQ=255) tgcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTAt > 2:1272113‑M1/66‑101 (MQ=255) gcggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATc > 1:993435‑M1/65‑101 (MQ=255) ggcgtgaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCg < 1:555113‑M1/39‑1 (MQ=255) gaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTaa > 1:887754‑M1/58‑101 (MQ=255) gaacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTaa < 2:32366‑M1/44‑1 (MQ=255) aacgccttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTaaa > 1:1557697‑M1/57‑101 (MQ=255) ttatccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACAtt > 2:1174147‑M1/51‑101 (MQ=255) atccagcctactaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTaa > 1:615968‑M1/49‑101 (MQ=255) atccagcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTaa < 2:311124‑M1/53‑1 (MQ=255) agcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAAccc < 2:870179‑M1/57‑1 (MQ=255) agcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAAccc < 2:662952‑M1/57‑1 (MQ=255) agcctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAAccc > 1:1494888‑M1/45‑101 (MQ=255) cctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGc < 2:845488‑M1/59‑1 (MQ=255) ctaccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCa < 1:1039258‑M1/60‑1 (MQ=255) ccaaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATa > 1:1432199‑M1/39‑101 (MQ=255) caaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATaa > 2:1659845‑M1/38‑101 (MQ=255) caaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATaa > 2:642371‑M1/38‑101 (MQ=255) caaacccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATaa > 2:265145‑M1/38‑101 (MQ=255) aatcccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAAc > 1:27594‑M1/37‑101 (MQ=255) cccgcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAAcgcg > 1:472918‑M1/34‑101 (MQ=255) gcactgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCtt > 2:1623076‑M1/31‑101 (MQ=255) actgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTcc < 2:259786‑M1/73‑1 (MQ=255) actgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTcc < 1:64182‑M1/73‑1 (MQ=255) actgattgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTcc > 2:555108‑M1/29‑101 (MQ=255) attgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGaaa < 1:610520‑M1/77‑1 (MQ=255) ttgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAaat > 2:1514910‑M1/24‑101 (MQ=255) tgtaggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAaata < 2:936319‑M1/79‑1 (MQ=255) taggcatgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAaataat > 2:528624‑M1/21‑101 (MQ=255) catgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGtt > 1:471956‑M1/17‑101 (MQ=255) catgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCCTCCGAAATAATCGtt < 1:1707028‑M1/85‑1 (MQ=255) atgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTc > 2:659444‑M1/16‑101 (MQ=255) tgataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTcg > 1:252788‑M1/15‑101 (MQ=255) gataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTcgc > 2:111980‑M1/14‑101 (MQ=255) gataagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTcgc > 2:911794‑M1/14‑101 (MQ=255) taagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTCGCGt > 2:1099238‑M1/12‑101 (MQ=255) aagacgcgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTCGCGTc < 2:1094816‑M1/91‑1 (MQ=255) cgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTCGCGTCCTTCAc > 2:1591307‑M1/5‑101 (MQ=255) cgcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTCGCGTCCTTCAc < 2:557433‑M1/97‑1 (MQ=255) gcaAGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTCGCGTCCTTCAcc > 2:118744‑M1/4‑101 (MQ=255) AGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTCGCGTCCTTCAccccc < 1:1542981‑M1/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGTCGCATCAGGCATCTGCGCACAAATGCCTTATCCGCCTAAAAACATTAAACCCGCAATAACGCGCTTCCGAAATAATCGTTCGCGTCCTTCACCCCC > 103/1‑101 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |