New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 1 | 1 = | 0 (0.000) | 26 (0.570) +CCTACGGTTCGATGCGATT |
19/162 | 0.6 | 52.1% | intergenic (–/–) | –/– | –/– |
? | 51 | 15466 = | 59 (1.320) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCC > 1/1‑101 | cggcacttattgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATa > 2:436231‑M1/68‑101 (MQ=255) gcacttattgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGt < 1:1705970‑M1/36‑1 (MQ=255) gcacttattgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGt > 2:935227‑M1/66‑101 (MQ=255) cagttttggtggatgcgattcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCAGCATCCGGCAAATAGTTa > 2:1669106‑M1/64‑101 (MQ=255) cttattgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTaa > 1:659894‑M1/63‑101 (MQ=255) ttattgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAAt > 2:392253‑M1/62‑101 (MQ=255) ttattgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAAt > 1:647971‑M1/62‑101 (MQ=255) tattgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAAtt > 2:1499820‑M1/61‑101 (MQ=255) tattgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAAtt < 1:138119‑M1/41‑1 (MQ=255) ttgtcggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGc > 1:341828‑M1/59‑101 (MQ=255) ggatgcgatgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTa > 2:397004‑M1/54‑101 (MQ=255) atgcttgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACttcttc < 2:71384‑M1/55‑1 (MQ=255) tgcgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCctc < 2:1486000‑M1/60‑1 (MQ=255) tgcgcatctcatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCctc < 1:211197‑M1/60‑1 (MQ=255) cgcatcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTg > 2:331496‑M1/40‑101 (MQ=255) tcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAAc < 1:221213‑M1/66‑1 (MQ=255) tcttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAAc < 2:1138316‑M1/66‑1 (MQ=255) ttatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCa > 1:698540‑M1/34‑101 (MQ=255) tatccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCAc < 1:1009397‑M1/69‑1 (MQ=255) ccgacctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACttt < 1:1128507‑M1/72‑1 (MQ=255) cctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtacta > 1:92568‑M1/26‑101 (MQ=255) ctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtactac > 1:16399‑M1/25‑101 (MQ=255) ctacaaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtactac < 1:635390‑M1/77‑1 (MQ=255) aaatcgcatcgagccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCGCTTTACTACCCAc > 1:81499‑M1/21‑101 (MQ=255) aaatcgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAc < 1:1552098‑M1/81‑1 (MQ=255) aaatcccattgaaccggtggCCCGAAAAAGCCTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAc > 2:1094214‑M1/21‑101 (MQ=255) cgcatcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAcgccg < 2:344897‑M1/85‑1 (MQ=255) tcgaaccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGt > 2:318774‑M1/13‑101 (MQ=255) ccgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTg > 1:1166716‑M1/8‑101 (MQ=255) taggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTAt < 1:1217433‑M1/97‑1 (MQ=255) aggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTAtt < 2:253176‑M1/98‑1 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTc < 1:869736‑M1/99‑1 (MQ=255) ccGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTccc < 1:239916/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCC > 1/1‑101 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |