New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	68	= 23344	0 (0.000)	39 (0.730)	30/176	1.1	49.1%	intergenic (–/–)	–/–	–/–
	?	91	8338 =	81 (1.500)					intergenic (–/–)	–/–	–/–

CATGGCTCCGCTGTGCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  68/23234‑23344 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgatgcgcTACGCTTATCAGGCCTACGCAATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCCGGATAAGGC  >  91/8338‑8406                                                                                                                                                                                      CATGGCTCCGCTGTGCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTG                                                                                 >  1:434570/1‑101   TGGCTCCGCTGTGCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCC                                                                               >  2:239633/1‑101       TCCGCTGTGCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGAT                                                                           <  2:630340/101‑1        CCGCTGTGCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATG                                                                          >  2:1017111/1‑101          GCTGTGCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCG                                                                        >  2:783478/1‑101              TGCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTAC                                                                    >  1:7765/1‑101              TGCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTAC                                                                    <  1:1418872/101‑1               GCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACG                                                                   >  2:486115/1‑101               GCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACG                                                                   <  1:1178651/101‑1               GCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACG                                                                   <  1:594375/101‑1                   AGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGAGCTACGCTTA                                                               >  2:1608328/1‑101                      GATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCA                                                            >  2:388236/1‑101                       ATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAG                                                           <  2:1452826/101‑1                        TTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGG                                                          <  1:102354/101‑1                          GTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCC                                                        <  1:1383866/101‑1                          GTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCC                                                        >  2:231280/1‑101                          GTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCC                                                        >  2:1638628/1‑101                           TGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCT                                                       <  1:1067923/101‑1                                                   CAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAA                               >  2:267210/1‑101                                                     ATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATT                             >  2:213478/1‑101                                                      TGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTT                            >  1:977808/1‑101                                                      TGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTT                            <  2:1565640/101‑1                                                             CGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCacgat                     >  2:1607995/1‑96                                                              GCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCacgatt                    <  1:1044239/101‑7                                                               CTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCacgattt                   <  1:1214924/101‑8                                                                TGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCacgatttt                  >  1:1611535/1‑93                                                                  AAAAGCGGGCTGAGACTGATGACAAACGCATCATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGT                >  1:65770/1‑101                                                                   AAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGACTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTA               >  1:843167/1‑101                                                                    AAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAG              <  1:1049690/101‑1                                                                     AGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAGG             <  2:69827/101‑1                                                                      GCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAGGC            <  1:808460/101‑1                                                                           CTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGTCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGAc       >  1:1634406/1‑100                                                                           CTGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGAT       <  1:218462/101‑1                                                                            cGAGACTGATTACAAACGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATGTTTTTGTAGGCCGGATA      <  2:613966/100‑1                                                                            TGAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATA      <  2:859310/101‑1                                                                             GAGACTGATTACAAACGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATGTTTTTGTAGGCCGGATAA     <  2:1021458/101‑1                                                                             GAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAA     >  2:570120/1‑101                                                                             GAGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAA     <  2:971134/101‑1                                                                              AGACTGATTACAAACGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATGTTTTTGTAGGCCGGATAAG    <  2:526270/101‑1                                                                              AGACTGATTACAAACGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATGTTTTTGTAGGCCGGATAAG    <  2:597310/101‑1                                                                              AGACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAG    >  1:481810/1‑101                                                                               GACTGATTACAAACGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATGTTTTTGTAGGCCGGATAAGG   <  2:426092/101‑1                                                                                ACTGATTACAAACGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATAATCTCTTCAATCTATTGAAATTGCATGTTTTTGTAGGCCGGATAAGGC  >  1:69253/1‑101                                                                                ACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACGCGTCCCCTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGC  >  1:940132/1‑101                                                                                                                                                                                      CATGGCTCCGCTGTGCGAAGCGATTGTGGCAGTGCTGTAAGCATTAAAAACAATGAAGCCCGCTGAAAAGCGGGCTGAGACTGATGACAAACGCAACATTGCCTGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  68/23234‑23344 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgatgcgcTACGCTTATCAGGCCTACGCAATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCCGGATAAGGC  >  91/8338‑8406

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.