New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 60 = 246930 (0.000)39 (0.660) 28/200 1.5 75.7% intergenic (–/–) –/– –/–
?66 3183 = 25 (0.430)intergenic (–/–) –/– –/–

ATATTTGTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  60/24596‑24693
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAAATAACAA  >  66/3183‑3255
                                                                                                                                                                           
ATATTTGTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCT                                                                        <  2:1545962/101‑1
      GTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCA                                                                  <  1:761751/101‑1
        CTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGC                                                                >  2:1487068/1‑101
         TGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCC                                                               >  1:1233439/1‑101
          GCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCT                                                              >  2:745412/1‑101
          GCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCT                                                              <  1:1570358/101‑1
            GCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTAC                                                            <  1:1055439/101‑1
            GCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTAC                                                            <  2:1165396/101‑1
             CAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACG                                                           <  2:355647/101‑1
             CAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACG                                                           >  2:1544588/1‑101
               GTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCAAGCCTACGGG                                                         >  2:1511792/1‑101
                TAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGA                                                        >  2:991541/1‑101
                  ACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATT                                                      <  1:266296/101‑1
                        GTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACAT                                                >  1:774614/1‑101
                           CCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTA                                             >  1:1349817/1‑101
                           CCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTA                                             <  2:1324106/101‑1
                            CGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAG                                            >  2:850945/1‑101
                             GCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGG                                           >  1:55841/1‑101
                             GCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGG                                           >  1:1209973/1‑101
                                   CTGGAGCAGATTGTCGGCCTGTACGCAGCGGGGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGAT                                     <  2:418873/101‑1
                                   CTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGAT                                     <  2:21289/101‑1
                                    TGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATA                                    >  2:475064/1‑101
                                          AGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGT                              >  2:1300165/1‑101
                                           GATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTT                             <  1:371244/101‑1
                                           GATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTT                             <  1:1145329/101‑1
                                            ATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTc                            <  1:390036/101‑2
                                             TTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTca                           <  1:269221/101‑3
                                               GTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACG                         >  1:124363/1‑101
                                                TCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGC                        >  2:380986/1‑101
                                                 CGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGCC                       <  2:1233434/101‑1
                                                 CGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGCC                       >  2:1492264/1‑101
                                                 CGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGCC                       >  2:867346/1‑101
                                                     CTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGCCGCAT                   >  2:437409/1‑101
                                                       GTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGTTTGCACATGTAGGGCGGATAAGGCGTTCACGCCGCATCC                 <  2:1042827/101‑1
                                                       GTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGCCGCATCC                 <  2:1493653/101‑1
                                                       GTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGCCGCATCC                 >  1:856017/1‑101
                                                                 GCGCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGCCGCATCCGCCAgtggcg       <  2:376410/101‑7
                                                                   GCAATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGCCGCATCCGCCAgtggcgcg     >  1:1411700/1‑93
                                                                      ATAAATGCCGGATGCGACGCTTGCCGCATCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTCACGCCGCATCCGGCAAAAAtttgatt  >  1:370499/1‑94
                                                                                                                                                                           
ATATTTGTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAAATGCCGGATGCGACGCTTGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  60/24596‑24693
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTATCCAGCCTACGGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAAATAACAA  >  66/3183‑3255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.