| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 47 | 1 = | 0 (0.000) | 64 (1.140) | 47/168 | 0.1 | 61.8% | intergenic (–/–) | –/– | –/– |
| ? | 91 | 8342 = | 79 (1.530) | intergenic (–/–) | –/– | –/– | |||||
AAGTCTATTATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 47/116‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgatgcgctacgCTTATCAGGCCTACGCAATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCCGGATAAGGCGTTCACTCCGCATCCGGCACTCTGTGCCAGTAATC > 91/8342‑8441 AAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAAT < 2:586629/101‑1AAGTCTATTATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAAT < 1:474001/101‑1AAGTCTATTATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAAT < 2:1148903/101‑1 GTCTATTATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGC < 2:604581/101‑1 CTATTATTAATACCGTAAATATTCATGCTTCTCACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCT > 2:855640/1‑101 TATTATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTG > 2:615343/1‑101 TATTATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTG < 2:652591/101‑1 TTATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGAT < 1:1226407/101‑1 ATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGC > 1:7946/1‑101 ATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGC > 1:1197102/1‑101 TAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGC > 2:717896/1‑101 AATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCT > 2:210514/1‑101 ATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTA > 2:832827/1‑101 ATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTA > 1:679480/1‑101 ATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTA > 1:723426/1‑101 ATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTA < 2:1154464/101‑1 ATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTA > 2:147292/1‑101 ACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACG < 1:1054238/101‑1 CGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCT > 2:945058/1‑101 GTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTT > 1:230494/1‑101 GTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTT > 1:896020/1‑101 AAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTAT > 1:924185/1‑101 ATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCA < 2:1404769/101‑1 TATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAG < 1:751405/101‑1 TATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAG > 2:504037/1‑101 TTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGC < 2:297873/101‑1 TCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCC < 1:1041813/101‑1 CATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCT > 1:995455/1‑101 ATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTA > 1:194031/1‑101 TGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTAC > 2:760524/1‑101 GCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACG < 1:615348/101‑1 CTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAGATGCCTGATGCGCTACGCTTATCAGGCCTACGC > 2:408121/1‑101 CTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGC > 2:1628535/1‑101 CTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGC > 2:184345/1‑101 TTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCc > 2:318577/1‑100 TTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGACTGATGCGCTACGCTTATCAGGCCTACGCc > 1:1341092/1‑100 TCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCca > 2:1695443/1‑99 TACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCT < 1:504924/101‑1 TACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCT < 1:945063/101‑1 CCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGGCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCT < 2:1493339/101‑1 CCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCT < 1:3673/101‑1 CCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTG > 2:228670/1‑101 CTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGC > 2:883971/1‑101 GTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAA > 1:981110/1‑101 TGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAAT < 2:125937/101‑1 GCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATA < 2:1293677/101‑1 GCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATA < 1:1521176/101‑1 CCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATAT > 2:1118675/1‑101 AAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTG < 2:1216991/101‑1 AAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTG < 2:1127452/101‑1 AAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGA < 2:972669/101‑1 AGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAT > 2:1561556/1‑101 AGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAT < 2:1118728/101‑1 AAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTG > 2:79261/1‑101 ACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTG < 1:1317848/101‑1 TTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCT > 2:894360/1‑101 TTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCT > 2:822517/1‑101 TTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCT > 1:777548/1‑101 TATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTT > 1:311807/1‑101 TATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGAGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTT < 1:557541/101‑1 TCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTT < 2:679475/101‑1 CGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTG > 1:1002041/1‑101 TGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAG < 1:860761/101‑1 TGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAG < 1:386553/101‑1 TGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAG < 2:928546/101‑1 TGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAG < 2:7946/101‑1 GCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGG < 2:1646793/101‑1 GTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGG < 1:167948/101‑1 TTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGAT < 1:95908/101‑1 TTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGAT < 1:455613/101‑1 TTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGAAGGCAGGAT > 2:559428/1‑101 GAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAA < 1:1139267/101‑1 AAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAG < 1:504042/101‑1 AACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGG < 1:1144565/101‑1 GGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCAC < 1:1680330/101‑1 GGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCAC < 1:1588784/101‑1 GCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACg > 2:139249/1‑100 AACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTC‑GCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCG < 2:1384728/101‑1 ACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCG < 2:568506/101‑1 CGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCA > 1:292123/1‑101 AAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCC < 2:327409/101‑1 AAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCC < 2:1355008/101‑1 GCTTATCAGGCCTACGCAATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCCGGATAAGGCGTTCACTCCGCATCCGGCACTCTGTGCCAGTAATC > 1:385032/1‑101 AAGTCTATTATTAATACCGTAAATATTCATGCTTCTTACCCTGTGCACCAAAAGCAAAAACTTATCGATGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 47/116‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgatgcgctacgCTTATCAGGCCTACGCAATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCCGGATAAGGCGTTCACTCCGCATCCGGCACTCTGTGCCAGTAATC > 91/8342‑8441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |