New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 40 | 1 = | 0 (0.000) | 83 (1.230) | 65/200 | 0.0 | 100% | intergenic (–/–) | –/– | –/– |
? | 5 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
ATATTCATACGCGCTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 40/98‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAG > 5/1‑98 ATATTCATACGCGCTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCC > 2:69535/1‑101 ATTCATACGCGCTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCAT > 2:114413/1‑101 ATTCATACGCGCTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCAT > 2:1045746/1‑101 ATACGCGCTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGC > 1:830688/1‑101 ACGCGCTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGC < 2:555046/101‑1 CGCTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAA < 1:551312/101‑1 GCTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAAC > 2:1260755/1‑101 GCTCAACGCCTTTCTGGAATAAACAAACTGCCCCTGCCGGCATATTCGAACGCCATCTTGATAGAGGAACGCGCCCGGGAGTTTACCCCATAAGCGCTAAC > 2:1174710/1‑101 CTCAACGCTTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACT < 2:970926/101‑1 CTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCTCTAACT < 1:1112310/101‑1 CTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACT > 2:595849/1‑101 CTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACT > 2:1349258/1‑101 CTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACT > 1:933850/1‑101 TCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTT < 1:1107884/101‑1 TCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTT > 1:1579142/1‑101 ACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAG > 1:82400/1‑101 ACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAG < 2:786802/101‑1 ACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAG > 1:87041/1‑101 CGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGG < 1:166184/101‑1 CGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGG > 1:699743/1‑101 CTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTT > 1:146024/1‑101 TGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACC < 2:442907/101‑1 ATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCT < 2:548429/101‑1 ATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCT > 2:862995/1‑101 ATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCT < 2:1385717/101‑1 ATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCT > 1:762518/1‑101 AACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAA < 1:1032886/101‑1 AACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAA > 1:644309/1‑101 ACAAACTGCGCCTGCCAGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAG < 2:560221/101‑1 CAAGCTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGA < 1:1030588/101‑1 CAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGCGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGA > 1:1390577/1‑101 AAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCACCTGAAGAA < 2:750909/101‑1 AACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAAT < 1:460672/101‑1 CTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGC < 1:990816/101‑1 CTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGC > 1:38962/1‑101 TGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCG < 2:1408359/101‑1 CGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGAC > 1:1218458/1‑101 CGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGAC < 1:835354/101‑1 CGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGAC < 2:471345/101‑1 CCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGATTACCCCATAAGCGCTAACTTAAGGGTTGAAAAATCTGAAGAATGAGACGC > 2:271916/1‑101 TGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCT < 1:574940/101‑1 CCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG < 2:1254568/101‑1 CCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCG < 2:830683/101‑1 CGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGG > 2:47691/1‑101 ATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCC > 1:1359325/1‑101 ATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCC > 2:1137985/1‑101 TATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCT > 2:57/1‑101 ATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTC > 2:1307150/1‑101 CGAACGTCATCTTGATAAAGGATCGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTT < 2:1671622/101‑1 GAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTA < 1:134045/101‑1 AACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAA < 2:760282/101‑1 ACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAG < 1:1220057/101‑1 GTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGAC > 1:1326132/1‑101 TCATCTTGATAAAGGAACGCGCCAGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACCCCTCGGTGCCTCGTTAAGACG > 2:1697239/1‑101 CATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGA > 1:1050119/1‑101 CATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGA > 1:1327630/1‑101 ATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGAT > 1:1578198/1‑101 ATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGAT > 1:501720/1‑101 ATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGAT > 2:1534286/1‑101 ATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGAT < 2:87041/101‑1 ATAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCG < 1:1228120/101‑1 TAAAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGC > 1:607473/1‑101 AAGGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGT > 2:1318928/1‑101 GGAACGCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTC > 2:633977/1‑101 CGCGCCCGGGGGTTTACCACATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCA < 1:813499/101‑1 GCGCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAA < 2:933845/101‑1 ctCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAAT < 1:230259/99‑1 GCCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATT < 2:1620433/101‑1 CCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTTCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTG < 2:1557349/101‑1 CCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATag > 2:230259/1‑99 CCCGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTG > 1:1553519/1‑101 CGGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCG > 1:1153229/1‑101 GGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGa > 2:1208789/1‑100 GGGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGT > 1:259195/1‑101 GGGGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTT > 2:566302/1‑101 GGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTT < 2:450263/101‑1 GGTTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTT < 2:1272602/101‑1 TTTCCCCCATAAGCGCTAACTTAAGTGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGT < 1:89249/101‑1 TTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGT > 2:1528207/1‑101 TTTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGT < 2:195966/101‑1 TTACCCCATAAGTGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTA > 2:1405086/1‑101 TTACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTA < 2:608357/101‑1 TACCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAG < 1:863000/101‑1 ATATTCATACGCGCTCAACGCCTTTCTGGAATAAACAAACTGCGCCTGCCGGCATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 40/98‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAG > 5/1‑98 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |