New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 39 1 =0 (0.000)45 (1.060)
+GTAAACGCCTTATCCGGCCTAC
39/156 0.1 100% intergenic (–/–) –/– –/–
?80 = 21134 0 (0.000)intergenic (–/–) –/– –/–

GTCAAGGCCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  39/96‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCTTTCAATTAAC  <  80/21134‑21038
                                                                                                ||||||||||||||||||||||                                                                                                 
GTCAAGGCCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAA                                                                                                                    >  2:710294/1‑101
GTCAAGGCCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGGAAA                                                                                                                    >  2:1191830/1‑101
 TCAAGGCCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAAC                                                                                                                   <  2:1033200/101‑1
 TCAAGGCCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAAC                                                                                                                   <  1:1051492/101‑1
   AAGGCCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGC                                                                                                                 >  2:1617406/1‑101
   AAGGCCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGC                                                                                                                 <  2:641128/101‑1
     GGCCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCT                                                                                                               >  1:1491888/1‑101
      GCCCGTTTTGGCAATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATCAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTT                                                                                                              >  2:1117591/1‑101
       CCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTA                                                                                                             <  1:1474361/101‑1
        CCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTAT                                                                                                            <  2:1657622/101‑1
        CCGTTTTGGCGATACATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTAT                                                                                                            <  2:1041780/101‑1
              TGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCC                                                                                                      >  1:806400/1‑101
                   ATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAA                                                                                                 >  2:171902/1‑101
                        TAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCT                                                                                            <  1:1223579/101‑1
                           TGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGC                                                                                         >  1:963581/1‑101
                               CTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAA                                                                                     >  1:753980/1‑101
                                  ATCATAAAATGTCCTGTAGTGGATCAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCG                                                                                  <  1:1117596/101‑1
                                    CATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGAT                                                                                <  1:535721/101‑1
                                    CATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGAT                                                                                >  2:153575/1‑101
                                    CATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGAT                                                                                >  1:97642/1‑101
                                     ATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACCAGAGCTCGCAAAATCGATA                                                                               >  2:445739/1‑101
                                       AAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAA                                                                             >  2:1499311/1‑101
                                        AAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAAT                                                                            >  1:715729/1‑101
                                         AATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATT                                                                           >  2:1013882/1‑101
                                         AATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATT                                                                           <  2:1332183/101‑1
                                              CCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGAT                                                                      <  1:1474985/101‑1
                                              CCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGAT                                                                      >  2:673539/1‑101
                                               CTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATT                                                                     <  2:227537/101‑1
                                               CTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATT                                                                     <  2:403067/101‑1
                                                TGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTG                                                                    >  2:1081264/1‑101
                                                  TAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCC                                                                  >  1:1055889/1‑101
                                                     TGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCC                                                               <  1:910795/101‑1
                                                       GATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGGAAAGGCCTTTTCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGGGATTGCCCCCAT                                                             >  2:1487613/1‑101
                                                           AGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGAC                                                         <  2:1658401/101‑1
                                                            GTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACC                                                        >  2:1630111/1‑101
                                                             TGACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCC                                                       >  1:252057/1‑101
                                                              GACAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCG                                                      >  2:818522/1‑101
                                                                CAAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGAT                                                    >  1:209089/1‑101
                                                                 AAAGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATA                                                   >  1:829177/1‑101
                                                                   AGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAA                                                 >  1:1577647/1‑101
                                                                   AGTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACACGATAAA                                                 >  1:1360163/1‑101
                                                                    GTGCATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAAC                                                <  2:963576/101‑1
                                                                        ATATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGC                                            >  1:1244107/1‑101
                                                                         TATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCG                                           <  2:1370423/101‑1
                                                                         TATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCG                                           >  2:676954/1‑101
                                                                         TATGTCTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCG                                           >  2:737949/1‑101
                                                                         TATGTCTGCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCG                                           <  2:1644170/101‑1
                                                                              CTTCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCG                                      <  2:1055884/101‑1
                                                                                TCTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGG                                    <  1:1549625/101‑1
                                                                                 CTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGC                                   >  2:789179/1‑101
                                                                                        GATGCGGCGTAAACGCCTTGTCCAGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTAT                            <  2:107914/101‑1
                                                                                         ATGCGGCGTAAACGCCTTATCCGGCGTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATA                           <  1:1617412/101‑1
                                                                                         ATGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATA                           <  2:1491882/101‑1
                                                                                          TGCGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATAC                          <  1:732179/101‑1
                                                                                            CGGCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTT                        <  1:683347/101‑1
                                                                                              GCGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGT                      >  2:1302605/1‑101
                                                                                               CGTAAACGCCTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTC                     <  1:960631/101‑1
                                                                                                        CTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCT            <  1:1191835/101‑1
                                                                                                        CTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCT            >  1:796791/1‑101
                                                                                                        CTTATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCT            >  1:1313139/1‑101
                                                                                                          TATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCTTT          <  1:1013887/101‑1
                                                                                                           ATCCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCTTTC         >  1:471063/1‑101
                                                                                                             CCGGCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCTTTCAA       >  2:362018/1‑101
                                                                                                                GCCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCTTTCAATTA    >  1:1444876/1‑101
                                                                                                                 CCTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCTTTCAATTAA   >  2:1178445/1‑101
                                                                                                                  CTACAAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCTTTCAATTAAC  <  1:365392/101‑1
                                                                                                ||||||||||||||||||||||                                                                                                 
GTCAAGGCCCGTTTTGGCGATCCATAATGAACTGATCATAAAATGTCCTGTAGTGGATTAGTGACAAAGTGCATATGTCTTCTTGCCGGATGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  39/96‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGTGCTCGCAAAATCGATAAATTGCGATTGCCCCCATAGACCCGATAAACTTGCGCATCGGGCAACTTATACTTGTCATGTATCCTTTCAATTAAC  <  80/21134‑21038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.