New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 38 | 21218 = | 53 (0.870) | 44 (0.890) | 40/172 | 0.2 | 65.9% | intergenic (–/–) | –/– | –/– |
? | 39 | = 32788 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
AAGCAGCTATCAGACAGAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 38/21331‑21218 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttatcaggcctacCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGATAACGCGGTTAA < 39/32788‑32689 AAGCAGCTATCAGACAGAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTC > 2:911000/1‑101 AAGCAGCTATCAGACAGAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTC > 2:589916/1‑101 AGCAGCTATCAGACAGAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCT < 1:227629/101‑1 GCTATCAGACAGAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATC > 2:1343981/1‑101 CTATCAGACAGAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCA < 1:1683163/101‑1 ACAGAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAC > 2:773242/1‑101 AGAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCG < 1:194600/101‑1 GAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGC > 1:478147/1‑101 AGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATT > 1:1124012/1‑101 GGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCC > 2:1296398/1‑101 GGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCA < 1:58960/101‑1 GAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAG < 2:1702985/101‑1 GAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAG < 1:1274391/101‑1 AATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGG > 2:1098139/1‑101 CTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGA < 1:1566496/101‑1 GAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGA > 2:25229/1‑101 ATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGC > 1:1139923/1‑101 ATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGC < 2:79922/101‑1 ACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTATCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGT > 1:85198/1‑101 ACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGT < 1:1319901/101‑1 TTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTT > 1:640684/1‑101 TAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTA > 2:323282/1‑101 TAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTA < 1:1714200/101‑1 AATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTAT < 2:1204026/101‑1 AATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTAT < 1:1098144/101‑1 GAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCC > 2:526236/1‑101 AGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCA < 1:1572017/101‑1 CTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTG > 2:573242/1‑101 TGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGT > 1:29297/1‑101 AAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTAC < 1:1023035/101‑1 AATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCG < 1:1384226/101‑1 ATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGA > 1:449197/1‑101 ATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGA < 2:1220816/101‑1 GCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATT < 1:1390308/101‑1 CCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTA < 1:898710/101‑1 ATGCGACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGC > 1:1568804/1‑101 GACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACT > 1:1718332/1‑101 GACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACT > 2:1618505/1‑101 ACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTT < 2:782864/101‑1 ACGCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTT < 2:728998/101‑1 GCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCA < 2:1091642/101‑1 GCTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCA > 2:1561879/1‑101 CTTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAA > 1:779580/1‑101 TTAACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAA > 2:1424399/1‑101 AACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACG < 1:700831/101‑1 ACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGC > 2:1357794/1‑101 ACGCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGC < 2:550688/101‑1 GCGTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGG > 1:408846/1‑101 GTCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGAC > 1:107310/1‑101 TCTTATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACG > 2:276749/1‑101 TATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGAT > 1:1670655/1‑101 TATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGACAGTGTACGTCGATTAATGAAACTTCAAACGCGGACGGAT > 2:1550101/1‑101 ATCAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGATA > 1:315698/1‑101 CAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGATAAC < 1:402261/101‑1 CAGGCCTACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGATAAC < 2:1001409/101‑1 CTACCGCTCGTTCCATTTGTCCAGGGCGGATGAGGCGTTTATGCCCCATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGATAACGCGGT < 1:550243/101‑1 TACCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGATAACGCGGTT < 2:377634/101‑1 ACCGCTCGTACCATTTGTCCAGGGCGGATGAGTTGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGATAACGCGGTTA < 1:997663/101‑1 CCGTTCGTCCCATTTGTCCAGGGCGGATGAGGCTTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGATAACGCGGTTAA < 2:1227385/101‑1 AAGCAGCTATCAGACAGAAGATGAAAAGCGCGGGAATGGCTGGAAATACTTAATGATTCGGAGGAGTCTGAAGGAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 38/21331‑21218 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttatcaggcctacCGCTCGTACCATTTGTCCAGGGCGGATGAGGCGTTTATGCCACATCCGCCAGTGTACGTCGATTAATGCAACTTCAAACGCGGACGGATAACGCGGTTAA < 39/32788‑32689 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |