| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 223 | = 698 | 0 (0.000) | 65 (0.080) +AGTTGGCAGCATCACC |
52/168 | 0.1 | 89.1% | intergenic (–/–) | –/– | –/– |
| ? | 81 | = 2325 | 19 (0.290) | intergenic (–/–) | –/– | –/– | |||||
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/619‑698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAATATCAGCGGAACGTC < 81/2325‑2227 |||||||||||||||| GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCA < 1:403920/101‑1GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCA < 1:847050/101‑1GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCA < 2:1197521/101‑1 CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCG < 2:1524925/101‑1 CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCG > 1:1552784/1‑101 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGT > 1:29657/1‑101 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTA < 1:813281/101‑1 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAA > 2:732777/1‑101 ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAAC > 2:1311734/1‑101 ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAAC < 1:503443/101‑1 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCC < 2:404214/101‑1 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCC < 2:328818/101‑1 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCC > 1:466621/1‑101 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCGGCATCACCCGTCAGCCGTAACCCCGCAT < 2:89813/101‑1 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCAT > 1:1360118/1‑101 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATT < 1:1463206/101‑1 AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGAT > 1:924234/1‑101 AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGAT > 1:479864/1‑101 AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGAT < 2:506103/101‑1 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTA < 2:238029/101‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTAC > 2:961177/1‑101 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTA > 2:609463/1‑101 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTA > 1:348436/1‑101 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTA > 1:62602/1‑101 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTAT > 2:220506/1‑101 AACAGAAGCCACTGGAGCACCTCAACAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTT < 1:463480/101‑1 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTT > 1:93867/1‑101 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTG < 1:1450443/101‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCATCCGTAACCCCGCATTGATTACTATGTTTGA > 2:473196/1‑101 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGAC < 2:1636343/101‑1 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACC < 1:108816/101‑1 AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCG > 1:798840/1‑101 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGAC > 2:1131695/1‑101 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGAC < 1:1134386/101‑1 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATT > 1:753940/1‑101 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTC < 1:609379/101‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGC > 1:1155899/1‑101 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGC > 1:1521589/1‑101 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGG > 2:633091/1‑101 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGG > 1:207274/1‑101 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGT > 2:82734/1‑101 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGT < 1:1718199/101‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTG > 2:1382000/1‑101 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTG > 2:1350571/1‑101 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGC > 1:1029869/1‑101 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGG > 1:1233782/1‑101 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGG > 2:351365/1‑101 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTT < 1:315654/101‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTT > 2:1667788/1‑101 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTT > 2:278735/1‑101 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTA > 1:1066756/1‑101 CATACACTAAATCAGTAAGTTGGGAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATA < 2:1240262/101‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATA > 1:901857/1‑101 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATAT < 2:1334197/101‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATAT > 1:134551/1‑101 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATAT > 1:8957/1‑101 ACACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTG < 1:633096/101‑1 CACTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGA < 2:684970/101‑1 CTAAATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACC < 2:819211/101‑1 ATCAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGat < 1:916936/101‑3 CAGTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGTATG < 2:189247/101‑1 GTAAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTA < 2:1360112/101‑1 AAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAA < 1:351365/101‑1 AAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAA < 1:1131700/101‑1 AAGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAA > 2:1338630/1‑101 AGTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAAT < 2:93867/101‑1 GTTGGCAGCATCACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAATA < 1:1253578/101‑1 cgtctCCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAATATCAGCGGA < 1:1311740/96‑1 CACCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAATATCAGCGGAACG < 1:1350577/101‑1 CCCGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAATATCAGCGGAACGTC > 2:640598/1‑101 |||||||||||||||| GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/619‑698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAATATCAGCGGAACGTC < 81/2325‑2227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |