| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 223 | = 698 | 0 (0.000) | 64 (0.080) +AGTTGGCAGCATCACC |
53/168 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 71 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/616‑698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAGC > 71/1‑100 |||||||||||||||| TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGT > 1:1015881/1‑101TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGT < 2:778626/101‑1 CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTT > 1:2914/1‑101 CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTT > 2:119628/1‑101 GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTT < 2:318637/101‑1 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTA > 1:1223821/1‑101 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAA < 2:449718/101‑1 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAA < 2:821195/101‑1 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAA < 1:609209/101‑1 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAA < 1:1453836/101‑1 AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCA < 2:1682495/101‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCT > 1:1345112/1‑101 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCT > 1:1608770/1‑101 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCT < 1:1387593/101‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCT > 1:75471/1‑101 GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTG < 1:690819/101‑1 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGT > 2:1442429/1‑101 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTG > 1:179887/1‑101 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCG > 2:749022/1‑101 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGA < 2:1609197/101‑1 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGA > 2:557057/1‑101 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATA < 1:77244/101‑1 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGAC < 1:1110405/101‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACT < 1:997944/101‑1 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTC < 1:820006/101‑1 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCT > 1:116565/1‑101 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCT < 2:1705825/101‑1 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTT > 2:1670485/1‑101 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTA > 2:295778/1‑101 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAA < 2:729259/101‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAA > 2:615444/1‑101 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAAT < 1:314608/101‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAAT < 1:871360/101‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAAT < 1:505496/101‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATG < 1:1021649/101‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATG > 2:1207552/1‑101 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAAT > 2:528925/1‑101 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAAT > 2:781027/1‑101 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAAT < 1:827391/101‑1 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATG > 2:844151/1‑101 AAACACCATCATACACTAAATCAGTAACTTTGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGNGCGATAACGACTAATTCTTTTAATGAATGn < 1:273163/101‑2 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTT < 1:1293965/101‑1 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTT > 1:953250/1‑101 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTA < 1:1202632/101‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTAT < 1:738470/101‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTAT < 2:746636/101‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTAT < 1:528930/101‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTC < 1:244027/101‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTC > 2:1627274/1‑101 CATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCC > 1:1637967/1‑101 CATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCC < 1:1311858/101‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCT < 1:943061/101‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCT > 2:54412/1‑101 ACACTAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGA > 1:939417/1‑101 TAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAATAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATAC > 2:998169/1‑101 TAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATAC < 1:518951/101‑1 TAAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATAC > 2:938718/1‑101 AAATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACT < 1:1450804/101‑1 ATCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGC < 1:1695464/101‑1 TCAGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCT < 1:1305026/101‑1 AGTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCC < 2:1036995/101‑1 GTAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCC < 1:1146199/101‑1 TAAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCA < 1:1447001/101‑1 AAGTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCAT < 2:1440064/101‑1 GTTGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAA < 1:1508138/101‑1 TGGCAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACA < 1:1157194/101‑1 CAGCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGA > 2:1650561/1‑101 GCATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACA < 1:392886/101‑1 CATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAG < 2:1608764/101‑1 CATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAG < 1:73957/101‑1 CATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAG > 2:1557055/1‑101 ATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGG > 2:635911/1‑101 ATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGG > 2:1542519/1‑101 ATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGG < 1:844156/101‑1 ATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGG > 1:132173/1‑101 ATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGG > 2:1417342/1‑101 ATCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGG > 1:1255881/1‑101 TCACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGG < 2:944698/101‑1 CACCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGG > 2:49432/1‑101 CCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAG > 1:681505/1‑101 CCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAG < 2:192208/101‑1 CGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAGC > 1:681285/1‑101 |||||||||||||||| TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/616‑698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCATAACAAGACAGGGGAGC > 71/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |