New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 223 | = 698 | 0 (0.000) | 65 (0.070) +A |
47/198 | 0.3 | 100% | intergenic (–/–) | –/– | –/– |
? | 48 | = 29957 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/603‑698 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATGTTGC < 48/29957‑29859 | acccccccCCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTG < 2:1111888/93‑1 agcccccCCCCCTCAGTAGCTGATCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGCGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGG < 1:453655/94‑1 gccCCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAGCACCATCATACACTAAATCAGTAAGTTGGC < 2:72848/98‑1 gccCCACCCCGTCAGAAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGC < 1:53207/98‑1 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA > 1:863816/1‑101 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA > 2:546470/1‑101 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA < 1:656389/101‑1 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA > 1:313287/1‑101 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA > 2:1506163/1‑101 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA > 2:658405/1‑101 TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAT < 2:1235259/101‑1 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAAT < 1:1213762/101‑1 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAAT < 1:379833/101‑1 AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATA > 2:395949/1‑101 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCT < 2:1151587/101‑1 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTA > 2:343235/1‑101 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTA > 2:904274/1‑101 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTA > 1:1310975/1‑101 ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATG > 1:8205/1‑101 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTA > 1:1371380/1‑101 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTAT < 1:292890/101‑1 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATT < 1:1601188/101‑1 aACAGCTGATAGAACCAGAAGCCACTGGAGCACCTCAAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCATTAATATCTATGTcggggct < 2:1637572/100‑8 AGCTAATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTC > 2:1716282/1‑101 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAAC > 2:1634960/1‑101 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACAT > 2:637186/1‑101 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTT < 2:1457882/101‑1 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTA > 2:924736/1‑101 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTA < 1:485547/101‑1 AACAGAAGCCACTGGAGCACCTCAAAAACCCCATCATACCGTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAA < 2:1199230/101‑1 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAAT < 2:1168998/101‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATT < 2:525954/101‑1 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTA < 2:1161785/101‑1 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTA < 1:43897/101‑1 AAGCCACTGGAGCACCTCAAAAACACCATCTTACACT‑AATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACAT > 2:1387733/1‑101 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATC > 2:620129/1‑101 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCC < 1:575561/101‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCC < 1:1634966/101‑1 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTC > 2:368276/1‑101 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCA < 1:815069/101‑1 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGA > 2:17718/1‑101 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAG < 1:593568/101‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAG < 2:1371374/101‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGC > 2:1375462/1‑101 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGC > 2:328943/1‑101 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCG > 2:924054/1‑101 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGG < 2:518424/101‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGG > 2:72781/1‑101 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGG > 1:185965/1‑101 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGc > 2:1439202/1‑100 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACA < 1:412974/101‑1 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACA < 1:468963/101‑1 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACC > 2:913746/1‑101 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCC < 1:924059/101‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCG > 1:21650/1‑101 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCG < 1:572542/101‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCCTGACAACCCGCAAG > 2:76961/1‑101 CACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGA < 2:1310969/101‑1 TAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAA < 2:933136/101‑1 TCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAAT < 2:185965/101‑1 TCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAAT < 2:651868/101‑1 TCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAAT < 1:763250/101‑1 CAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATG < 1:829780/101‑1 AGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATGT > 2:487275/1‑101 AAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATGTTGC > 2:1485478/1‑101 | ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/603‑698 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATGTTGC < 48/29957‑29859 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |