New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 223 = 6980 (0.000)65 (0.070)
+A
47/198 0.3 100% intergenic (–/–) –/– –/–
?48 = 29957 0 (0.000)intergenic (–/–) –/– –/–

ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  223/603‑698
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATGTTGC  <  48/29957‑29859
                                                                                                |                                                                                                   
acccccccCCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTG                                                                                                 <  2:1111888/93‑1
 agcccccCCCCCTCAGTAGCTGATCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGCGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGG                                                                                                <  1:453655/94‑1
  gccCCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAGCACCATCATACACTAAATCAGTAAGTTGGC                                                                                               <  2:72848/98‑1
  gccCCACCCCGTCAGAAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGC                                                                                               <  1:53207/98‑1
            GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                     >  1:863816/1‑101
            GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                     >  2:546470/1‑101
            GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                     <  1:656389/101‑1
            GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                     >  1:313287/1‑101
            GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                     >  2:1506163/1‑101
            GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                     >  2:658405/1‑101
             TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAT                                                                                    <  2:1235259/101‑1
                 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAAT                                                                                <  1:1213762/101‑1
                 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAAT                                                                                <  1:379833/101‑1
                  AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATA                                                                               >  2:395949/1‑101
                     TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCT                                                                            <  2:1151587/101‑1
                      GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTA                                                                           >  2:343235/1‑101
                      GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTA                                                                           >  2:904274/1‑101
                      GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTA                                                                           >  1:1310975/1‑101
                        ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATG                                                                         >  1:8205/1‑101
                          AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTA                                                                       >  1:1371380/1‑101
                           GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTAT                                                                      <  1:292890/101‑1
                            GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATT                                                                     <  1:1601188/101‑1
                                aACAGCTGATAGAACCAGAAGCCACTGGAGCACCTCAAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCATTAATATCTATGTcggggct                                                                 <  2:1637572/100‑8
                                   AGCTAATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTC                                                              >  2:1716282/1‑101
                                      TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAAC                                                           >  2:1634960/1‑101
                                        ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACAT                                                         >  2:637186/1‑101
                                           GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTT                                                      <  2:1457882/101‑1
                                            AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTA                                                     >  2:924736/1‑101
                                            AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTA                                                     <  1:485547/101‑1
                                             AACAGAAGCCACTGGAGCACCTCAAAAACCCCATCATACCGTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAA                                                    <  2:1199230/101‑1
                                              ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAAT                                                   <  2:1168998/101‑1
                                               CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATT                                                  <  2:525954/101‑1
                                                AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTA                                                 <  2:1161785/101‑1
                                                AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTA                                                 <  1:43897/101‑1
                                                  AAGCCACTGGAGCACCTCAAAAACACCATCTTACACTAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACAT                                              >  2:1387733/1‑101
                                                    GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATC                                             >  2:620129/1‑101
                                                     CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCC                                            <  1:575561/101‑1
                                                     CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCC                                            <  1:1634966/101‑1
                                                        CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTC                                         >  2:368276/1‑101
                                                         TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCA                                        <  1:815069/101‑1
                                                             GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGA                                    >  2:17718/1‑101
                                                              CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAG                                   <  1:593568/101‑1
                                                              CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAG                                   <  2:1371374/101‑1
                                                                CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGC                                 >  2:1375462/1‑101
                                                                CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGC                                 >  2:328943/1‑101
                                                                   CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCG                              >  2:924054/1‑101
                                                                    AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGG                             <  2:518424/101‑1
                                                                    AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGG                             >  2:72781/1‑101
                                                                     AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGG                            >  1:185965/1‑101
                                                                      AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGc                           >  2:1439202/1‑100
                                                                        ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACA                         <  1:412974/101‑1
                                                                        ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACA                         <  1:468963/101‑1
                                                                           CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACC                      >  2:913746/1‑101
                                                                            CATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCC                     <  1:924059/101‑1
                                                                             ATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCG                    >  1:21650/1‑101
                                                                             ATCATACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCG                    <  1:572542/101‑1
                                                                                 TACACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCCTGACAACCCGCAAG                >  2:76961/1‑101
                                                                                   CACTAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGA              <  2:1310969/101‑1
                                                                                      TAAATCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAA           <  2:933136/101‑1
                                                                                          TCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAAT       <  2:185965/101‑1
                                                                                          TCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAAT       <  2:651868/101‑1
                                                                                          TCAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAAT       <  1:763250/101‑1
                                                                                           CAGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATG      <  1:829780/101‑1
                                                                                            AGTAAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATGT     >  2:487275/1‑101
                                                                                               AAGTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATGTTGC  >  2:1485478/1‑101
                                                                                                |                                                                                                   
ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  223/603‑698
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGGCAGCATCACCATTAATATCTATGTATTTTGATTCAACATTTTAATTACATCCGTCAAAGAGGCTCGGGACAACCCGCAAGGAAAACAATGTTGC  <  48/29957‑29859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.