New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 222 = 14430 (0.000)73 (0.050) 60/200 0.1 96.7% intergenic (–/–) –/– –/–
?86 = 2269 5 (0.070)intergenic (–/–) –/– –/–

ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  222/1349‑1443
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACCACCGG  <  86/2269‑2170
                                                                                                                                                                                                   
ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACG                                                                                                <  1:1297446/101‑1
ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACG                                                                                                <  2:1262331/101‑1
ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACG                                                                                                >  1:1370840/1‑101
ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACG                                                                                                >  1:530649/1‑101
  TAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGA                                                                                              <  2:659901/101‑1
    GCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACT                                                                                            <  2:359373/101‑1
      CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACTTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTT                                                                                          >  2:1662789/1‑101
      CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTT                                                                                          >  1:537603/1‑101
       TGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTC                                                                                         <  2:768804/101‑1
        GAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCGGTACAATCACGGACTTTCG                                                                                        <  1:1201572/101‑1
        GAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATAACGGACTTTCG                                                                                        >  2:62932/1‑101
         AAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGG                                                                                       >  2:723905/1‑101
          AATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGC                                                                                      >  2:496765/1‑101
          AATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGC                                                                                      <  2:1383425/101‑1
           ATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCG                                                                                     >  2:142688/1‑101
               AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTA                                                                                 <  2:1642283/101‑1
               AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTA                                                                                 >  2:103449/1‑101
                 AGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAG                                                                               <  2:421824/101‑1
                  GGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGC                                                                              <  2:1432439/101‑1
                    TCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGT                                                                            >  1:1476898/1‑101
                      TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCG                                                                          <  2:45359/101‑1
                       GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGG                                                                         <  1:230459/101‑1
                        ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGC                                                                        >  2:57571/1‑101
                        ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGC                                                                        >  2:844974/1‑101
                         CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCT                                                                       >  1:964875/1‑101
                         CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCT                                                                       >  2:1441653/1‑101
                           CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGG                                                                     >  2:93468/1‑101
                           CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGG                                                                     <  2:903259/101‑1
                             AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGG                                                                   <  2:26446/101‑1
                              ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGC                                                                  >  1:908616/1‑101
                               TTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCT                                                                 <  1:1206647/101‑1
                                TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTA                                                                <  1:1283850/101‑1
                                TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTA                                                                >  2:834031/1‑101
                                 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTAC                                                               <  2:131961/101‑1
                                  AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACA                                                              >  2:464071/1‑101
                                   ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAG                                                             >  1:1075727/1‑101
                                   ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAG                                                             >  1:95306/1‑101
                                   ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAG                                                             >  2:1179111/1‑101
                                    TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGC                                                            >  1:205852/1‑101
                                         GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTAT                                                       <  2:1370834/101‑1
                                         GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTAT                                                       <  2:52823/101‑1
                                          AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATA                                                      <  2:407361/101‑1
                                           ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAA                                                     <  1:655426/101‑1
                                                 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACT                                               <  1:103449/101‑1
                                                 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACT                                               <  2:1262864/101‑1
                                                 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACT                                               <  1:1179116/101‑1
                                                  CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTG                                              >  1:104580/1‑101
                                                  CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTG                                              >  2:360408/1‑101
                                                   TATATGCCTCGTGTTTAAATGTCAAACTTTTTGGGGCCGGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTCTAACGAACTGG                                             >  2:250474/1‑101
                                                      ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTG                                          >  1:889357/1‑101
                                                       TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGC                                         >  2:886884/1‑101
                                                        GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCA                                        <  2:1490200/101‑1
                                                           TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGG                                     >  1:1478726/1‑101
                                                            CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGC                                    <  2:917314/101‑1
                                                              TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTG                                  >  2:698199/1‑101
                                                              TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTG                                  <  1:886599/101‑1
                                                               GTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGG                                 >  1:1638472/1‑101
                                                                 TTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGAT                               <  2:1505859/101‑1
                                                                 TTAACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGAT                               <  1:57571/101‑1
                                                                   AACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGC                             >  2:956764/1‑101
                                                                   AACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGC                             <  2:1247024/101‑1
                                                                    ACTGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCA                            <  2:788623/101‑1
                                                                      TGTCCAACTTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGTCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGC                          <  1:487803/101‑1
                                                                              TTTTTGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAA                  <  2:351637/101‑1
                                                                                  TGGGGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCA              <  2:85127/101‑1
                                                                                     GGTCAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACT           >  1:589302/1‑101
                                                                                        CAGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCAC        >  2:121067/1‑101
                                                                                         AGTACAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACC       <  1:575769/101‑1
                                                                                             CAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACCACCG   >  2:414475/1‑101
                                                                                             CAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACCACCG   >  2:148880/1‑101
                                                                                             CAATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACCACCG   <  1:496770/101‑1
                                                                                              AATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACCACCGG  <  2:537598/101‑1
                                                                                              AATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACCACCGG  >  2:639225/1‑101
                                                                                                                                                                                                   
ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  222/1349‑1443
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACCACCGG  <  86/2269‑2170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.