New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	222	= 1443	0 (0.000)	64 (0.040)	48/198	0.4	100%	intergenic (–/–)	–/–	–/–
	?	81	9928 =	0 (0.000)					intergenic (–/–)	–/–	–/–

AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  222/1348‑1443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTGGGAGAT  >  81/9928‑10026                                                                                                                                                                                                     AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTG                                                                                                <  2:878050/101‑1  ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGG                                                                                               >  2:804899/1‑101   TTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGG                                                                                              <  1:1061714/101‑1    TAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGnnnnt                                                                                             <  2:7620/101‑6     AGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGC                                                                                            <  2:145021/101‑1      GCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCC                                                                                           <  1:956307/101‑1      GCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCC                                                                                           >  2:1597352/1‑101       CCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCA                                                                                          >  2:1638328/1‑101        CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCAC                                                                                         >  1:939168/1‑101        CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCAC                                                                                         <  1:729903/101‑1        CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCAC                                                                                         >  2:396305/1‑101            AATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATG                                                                                     <  1:1231174/101‑1              TTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTC                                                                                   <  1:1546565/101‑1               TAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTtc                                                                                  <  2:1023410/101‑3               TAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCG                                                                                  >  2:357262/1‑101               TAAAAGGACTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCG                                                                                  <  2:1250797/101‑1                AAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGA                                                                                 >  1:461595/1‑101                AAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGA                                                                                 >  1:677060/1‑101                AAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGGCAGTACAGAGTGGGGCCACCATGTCGA                                                                                 >  1:1169707/1‑101                 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAG                                                                                <  1:358497/101‑1                 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAG                                                                                <  2:460819/101‑1                 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAG                                                                                <  1:657794/101‑1                 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAG                                                                                >  1:1336601/1‑101                 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAG                                                                                <  1:786759/101‑1                       CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGA                                                                          <  1:1459279/101‑1                       CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGA                                                                          >  2:269013/1‑101                         GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATT                                                                        >  2:475232/1‑101                          ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTT                                                                       <  2:1072394/101‑1                          ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTT                                                                       <  2:560163/101‑1                             CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTC                                                                    >  1:1020949/1‑101                                ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCTGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCT                                                                 >  2:1321588/1‑101                                   GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGT                                                              <  2:1624408/101‑1                                    AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTG                                                             <  2:1642925/101‑1                                          GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAG                                                       <  1:955126/101‑1                                          GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAG                                                       <  2:23606/101‑1                                           GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGC                                                      >  2:1382146/1‑101                                             ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTTAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCT                                                    >  2:1257608/1‑101                                             ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCT                                                    <  1:368154/101‑1                                             ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCT                                                    <  2:414825/101‑1                                               CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCC                                                  <  2:1365954/101‑1                                                        ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATC                                         <  1:1620247/101‑1                                                          GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGC                                       >  1:362995/1‑101                                                           CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCT                                      >  2:206268/1‑101                                                            CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTA                                     >  2:618962/1‑101                                                               GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACG                                  >  1:915288/1‑101                                                                 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGT                                >  1:601737/1‑101                                                                 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGT                                >  1:1038338/1‑101                                                                  TTTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTT                               >  2:281134/1‑101                                                                   TTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTG                              <  2:844421/101‑1                                                                   TTAACTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTG                              >  2:354076/1‑101                                                                       CTGTCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCG                          <  1:597040/101‑1                                                                          TCCAACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTA                       >  1:1368386/1‑101                                                                             AACTTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATAT                    <  2:1224653/101‑1                                                                                TTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGC                 >  2:1682170/1‑101                                                                                TTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGC                 <  2:1043435/101‑1                                                                                TTTTTGGGGTCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGC                 >  1:55026/1‑101                                                                                         ttAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTG        <  1:1257613/99‑1                                                                                         gCAGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTG        <  2:1623752/100‑1                                                                                           tGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTGGG      <  1:1321594/100‑1                                                                                           AGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTGGG      >  2:611128/1‑101                                                                                           AGTACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTGGG      <  1:797318/101‑1                                                                                              ACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTGGGAGA   <  2:126480/101‑1                                                                                              ACAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTGGGAGA   <  1:1577727/101‑1                                                                                               CAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTGGGAGAT  <  1:649133/101‑1                                                                                                                                                                                                     AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  222/1348‑1443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGCGGCGCGCTGGGAGAT  >  81/9928‑10026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.