New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 222 | = 1443 | 0 (0.000) | 78 (0.050) | 58/200 | 0.3 | 98.7% | intergenic (–/–) | –/– | –/– |
? | 45 | = 27667 | 2 (0.030) | intergenic (–/–) | –/– | –/– |
GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 222/1347‑1443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTACCGT < 45/27667‑27569 GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTT < 1:141847/101‑1 GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTT < 2:294386/101‑1 TAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGG > 1:1212296/1‑101 TAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGG > 2:1625841/1‑101 AGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGC > 2:445853/1‑101 AATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTT < 2:376903/101‑1 AATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTT > 1:1495137/1‑101 ATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTG > 1:179793/1‑101 TTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGA > 1:1078455/1‑101 AAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGT < 1:790691/101‑1 AAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGT > 1:1487317/1‑101 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTA > 1:920672/1‑101 AAGGTCTGACTCCAATTGAATATCGGAATCACACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTTAGTAA < 1:1225083/101‑1 TCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTA < 1:65380/101‑1 TCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTA < 1:1465919/101‑1 CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAA > 1:306600/1‑101 TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAA < 1:554556/101‑1 TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAA < 2:1143846/101‑1 TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAA < 2:1695539/101‑1 GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAAC < 1:872539/101‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACC < 2:791099/101‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACC < 2:335402/101‑1 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCC > 2:122796/1‑101 TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCT < 1:119886/101‑1 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTT > 1:895698/1‑101 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTT > 1:1185206/1‑101 CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTC < 2:127455/101‑1 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCT < 1:1276634/101‑1 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCT > 1:121554/1‑101 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCT > 1:233435/1‑101 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTG < 1:1337204/101‑1 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTG > 2:1633319/1‑101 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACGGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCTCTGTTGAGTAAAGTAAACCCTTCTG < 2:1287601/101‑1 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTT > 2:1054911/1‑101 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTAT > 1:1047508/1‑101 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTAT > 1:1710169/1‑101 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTAT > 2:1071290/1‑101 CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCA < 2:748196/101‑1 GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAAC < 1:1251553/101‑1 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACT > 1:441999/1‑101 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCAT < 1:915918/101‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATT > 2:758668/1‑101 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTG < 1:1068382/101‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTG < 2:1562833/101‑1 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGG > 2:1087168/1‑101 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGC > 2:1439141/1‑101 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGC > 2:1661800/1‑101 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGC > 2:1437141/1‑101 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCA < 1:1172314/101‑1 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCAT < 2:829835/101‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGT < 2:1234973/101‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGT < 2:738109/101‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTG > 1:1701390/1‑101 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTG > 1:804306/1‑101 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGC < 2:174131/101‑1 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCG > 1:213716/1‑101 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGC > 2:444934/1‑101 TAACTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTT < 1:122796/101‑1 CTGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCTACTGCATTGGCATCAGGTGCGCCAGTTCCG > 2:1541328/1‑101 TGTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGC > 1:424835/1‑101 GTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCG > 2:174153/1‑101 GTCCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCG > 1:1421362/1‑101 CCAACTTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGAC < 2:225974/101‑1 TTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTAT < 1:1071295/101‑1 TTTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTAT < 2:14995/101‑1 TTTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATG < 1:540812/101‑1 TTTGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGGTCCGCGACCTTATGC < 2:1277047/101‑1 TGGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCC < 2:610520/101‑1 GGGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCG > 2:610689/1‑101 GGGTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGT > 2:262368/1‑101 GTCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCT < 2:737355/101‑1 TCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTG < 1:1465293/101‑1 TCAGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTG < 2:365315/101‑1 AGTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTA > 2:180680/1‑101 GTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCTTCTGTAC > 1:576137/1‑101 GTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTAC > 1:661892/1‑101 GTACAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTAC < 1:956184/101‑1 CAATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTACCGT < 2:1319501/101‑1 GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 222/1347‑1443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTACCGT < 45/27667‑27569 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |