New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 222 = 14430 (0.000)64 (0.040) 50/198 0.1 99.2% intergenic (–/–) –/– –/–
?25 24573 = 1 (0.020)intergenic (–/–) –/– –/–

GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  222/1347‑1443
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGCCCAC  >  25/24573‑24671
                                                                                                                                                                                                    
GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAC                                                                                                 >  1:405072/1‑101
 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACG                                                                                                >  2:56347/1‑101
 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACG                                                                                                <  2:1449586/101‑1
 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACG                                                                                                <  1:296929/101‑1
  ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGA                                                                                               >  2:73473/1‑101
    TAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGG                                                                                             <  1:1016286/101‑1
     AGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGC                                                                                            >  1:720869/1‑101
       CCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTA                                                                                          >  1:1446835/1‑101
        CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAA                                                                                         >  2:1144153/1‑101
           AAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAAT                                                                                      >  1:1531019/1‑101
           AAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAAT                                                                                      <  1:449185/101‑1
               TAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACT                                                                                  <  2:1692733/101‑1
                   AGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAAT                                                                              <  2:1162923/101‑1
                    GGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATA                                                                             <  2:1284020/101‑1
                     GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATAC                                                                            <  2:863581/101‑1
                         GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATC                                                                        <  2:1196061/101‑1
                          ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCC                                                                       >  1:556307/1‑101
                           CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCG                                                                      <  1:639576/101‑1
                              CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCG                                                                   >  2:108657/1‑101
                               AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCTGCGc                                                                  >  2:510126/1‑100
                                ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAA                                                                 >  1:940252/1‑101
                                ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAA                                                                 >  1:1699420/1‑101
                                ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAA                                                                 >  1:1278806/1‑101
                                    AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCG                                                             <  2:12124/101‑1
                                           GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAAC                                                      <  2:1673131/101‑1
                                           GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAAC                                                      <  2:839281/101‑1
                                            AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACA                                                     >  1:483842/1‑101
                                                AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTG                                                 >  1:345825/1‑101
                                                 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTTAATACAATCCGGCGAAATCGCGCGAACAGTTGA                                                >  1:1659470/1‑101
                                                 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGA                                                >  2:1129735/1‑101
                                                   CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAG                                              <  1:1293543/101‑1
                                                        ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTT                                         >  1:839942/1‑101
                                                        ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTT                                         >  2:430816/1‑101
                                                         TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGAGAAATCGCGCGAACAGTTGAAGTCGTTG                                        >  2:469753/1‑101
                                                          GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGG                                       <  2:1222349/101‑1
                                                            CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGG                                     <  2:1306985/101‑1
                                                            CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGG                                     >  1:1669648/1‑101
                                                            CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGG                                     >  1:586378/1‑101
                                                              CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCT                                   >  1:1195809/1‑101
                                                               GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTG                                  >  1:375459/1‑101
                                                                TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGG                                 <  2:573607/101‑1
                                                                TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGG                                 >  1:1196813/1‑101
                                                                 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGA                                >  1:914556/1‑101
                                                                 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAAGCCGGCCAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGA                                <  2:1654478/101‑1
                                                                     AACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAAT                            <  1:420240/101‑1
                                                                       CTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTT                          <  2:122490/101‑1
                                                                         GTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAA                        >  2:754797/1‑101
                                                                         GTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAA                        <  1:1589576/101‑1
                                                                         GTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAA                        <  1:1419889/101‑1
                                                                          TCCAACTTTTTGGGGTCAGTACACAACGAGGTTAAAATTACTGATTACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAAC                       <  1:73473/101‑1
                                                                          TCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAAC                       <  1:690173/101‑1
                                                                          TCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAAC                       <  2:962076/101‑1
                                                                              ACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTG                   >  2:934278/1‑101
                                                                                TTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAA                 <  2:1278801/101‑1
                                                                                TTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAA                 <  2:1458886/101‑1
                                                                                   TTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACT              <  2:1004300/101‑1
                                                                                        GTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGG         >  1:655276/1‑101
                                                                                         TCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGT        <  2:1699414/101‑1
                                                                                         TCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGT        <  2:1669642/101‑1
                                                                                         TCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGT        <  1:608735/101‑1
                                                                                          CAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTG       >  2:1132092/1‑101
                                                                                           AGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGn      <  1:611447/101‑2
                                                                                            GTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACATTGGGTGCC     >  1:1485074/1‑101
                                                                                               CACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGCCCAC  <  1:1445518/101‑1
                                                                                                                                                                                                    
GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  222/1347‑1443
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGCCCAC  >  25/24573‑24671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.