New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	222	1 =	0 (0.000)	51 (0.030)	40/200	0.6	99.0%	intergenic (–/–)	–/–	–/–
	?	8	32121 =	1 (0.020)					intergenic (–/–)	–/–	–/–

TTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  222/94‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAATGGCTCACGCTCGGTGACTTCCA  >  8/32121‑32220                                                                                                                                                                                                    TTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCAT                                                                                               <  2:688924/101‑1  TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATC                                                                                              >  2:623900/1‑101  TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATC                                                                                              <  1:1244465/101‑1    ACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCA                                                                                            >  2:1207194/1‑101    ACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCA                                                                                            <  2:1075992/101‑1       ACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCG                                                                                         <  1:488903/101‑1        CTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGC                                                                                        >  2:637780/1‑101        CTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGC                                                                                        >  2:144012/1‑101         TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCG                                                                                       >  1:1067383/1‑101           aAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAAGCATCCAGCGCGAT                                                                                     <  2:482722/100‑1                CGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAA                                                                                >  1:1057536/1‑101                  CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAA                                                                              >  2:1114028/1‑101                     TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGTGCGATGACAAAACCA                                                                           >  2:244596/1‑101                      TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCAT                                                                          >  1:1648679/1‑101                          AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTC                                                                      <  2:118178/101‑1                           AGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCA                                                                     <  2:724931/101‑1                            GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCAT                                                                    <  2:585739/101‑1                            GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCAT                                                                    <  1:144012/101‑1                                ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAG                                                                >  1:204680/1‑101                                 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGT                                                               <  1:43872/101‑1                                  TTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTA                                                              >  2:813139/1‑101                                  TTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTA                                                              >  1:1347543/1‑101                                      GCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTT                                                          <  2:180256/101‑1                                         TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAA                                                       <  1:637785/101‑1                                          TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTGTGTTCAAC                                                      <  2:191446/101‑1                                              ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCT                                                  >  2:274991/1‑101                                                  TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAAC                                              >  2:800999/1‑101                                                  TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGGACAAAATCATCCAGCGAGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAAC                                              >  2:475592/1‑101                                                       GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGAC                                         >  1:1358803/1‑101                                                       GCTATTCCATTTCATCGGCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGAC                                         <  1:1479317/101‑1                                                         TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTT                                       >  2:992820/1‑101                                                         TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTT                                       >  2:848583/1‑101                                                               ATTTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCA                                 >  1:291225/1‑101                                                                 TTCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAAC                               >  2:293308/1‑101                                                                  TCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACA                              <  2:458557/101‑1                                                                  TCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACA                              >  1:1464289/1‑101                                                                  TCATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACA                              <  1:305006/101‑1                                                                   CATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACAT                             >  1:665366/1‑101                                                                   CATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACAT                             >  2:900869/1‑101                                                                   CATCGTCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACAT                             <  1:1114033/101‑1                                                                        TCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAAT                        <  2:984173/101‑1                                                                        TCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAAT                        <  2:204680/101‑1                                                                        TCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAAT                        <  2:610800/101‑1                                                                        TCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAAT                        <  2:827745/101‑1                                                                        TCCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAAT                        <  1:623905/101‑1                                                                         CCAACAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAATG                       >  2:452770/1‑101                                                                             CAAAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAATGGCTC                   >  1:1669775/1‑101                                                                               AAATGGGTGCAGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAATGGCTCAC                 >  1:740528/1‑101                                                                                         AGTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAATGGCTCACGCTCGGTGAC       >  1:473281/1‑101                                                                                          GTACAAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAATGGCTCACGCTCGGTGACT      >  2:1471/1‑101                                                                                              AAAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAATGGCTCACGCTCGGTGACTTCCA  <  1:811580/101‑1                                                                                                                                                                                                    TTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  222/94‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAATCATCCAGCGCGATGACAAAACCATTTTCATGCAGTATGTTCAACCGCTGAACCAGACTTTCATCAACATTCAATGGCTCACGCTCGGTGACTTCCA  >  8/32121‑32220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.