New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 222 | 1 = | 0 (0.000) | 84 (0.050) +G |
67/198 | 0.1 | 89.9% | intergenic (–/–) | –/– | –/– |
? | 62 | 21548 = | 19 (0.250) | intergenic (–/–) | –/– | –/– |
AGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/99‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTG > 62/21548‑21646 | AGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGC > 2:979191/1‑101 AGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGC > 2:263790/1‑101 GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCC > 2:271793/1‑101 GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCC < 1:337514/101‑1 GATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCG < 1:493517/101‑1 GATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCG < 1:367832/101‑1 TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCT > 2:57812/1‑101 TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCT < 1:989006/101‑1 TCACGACCTCAAGGCGCTTTTCAAATGGCTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCGGGCT < 2:1398930/101‑1 CACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTG < 1:617814/101‑1 ACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGG < 2:213756/101‑1 GACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAA > 1:462792/1‑101 CTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAA > 2:327075/1‑101 TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAAT < 1:302677/101‑1 TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAAT < 1:1688514/101‑1 TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAAT < 1:1573903/101‑1 TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAAT < 2:782479/101‑1 TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAAT < 1:1542808/101‑1 TCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATG < 2:1055032/101‑1 AAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCC > 2:221912/1‑101 AGGCGTTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGCGTTATTCCATTTCAGCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCT < 2:194470/101‑1 AGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCT < 1:277499/101‑1 GCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGC < 1:777998/101‑1 CGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCG > 2:819787/1‑101 CGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCG > 2:351952/1‑101 CGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTACATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCG < 2:1364981/101‑1 GCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGG > 2:1119014/1‑101 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGAT < 2:444423/101‑1 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATC > 2:47345/1‑101 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCC > 1:1695753/1‑101 AAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCG > 1:1387814/1‑101 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCT > 1:942774/1‑101 AGGGCATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCACGGCTGGAAAATGCCTGCGGATATCCGCTT > 1:364345/1‑101 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACA < 2:593746/101‑1 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAG < 2:1555091/101‑1 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAG > 1:687749/1‑101 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAG < 2:421997/101‑1 ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGC > 1:697972/1‑101 TTGGCTTTGACATATTAGGGGCTATTCCAGTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGC < 1:976062/101‑1 TGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCG > 2:825644/1‑101 TGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCG > 1:210335/1‑101 GCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCG > 1:152407/1‑101 TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATA < 1:57505/101‑1 TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATA > 2:4041/1‑101 GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAAC < 2:395506/101‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACA > 2:701090/1‑101 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACA > 2:1366354/1‑101 CATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACAC > 1:545005/1‑101 CATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACAC < 2:545000/101‑1 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACA < 1:673973/101‑1 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACGCT < 2:1491817/101‑1 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGAT < 2:1317187/101‑1 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGAT > 1:5315/1‑101 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATACCCGCTTCCAGCTGCGCGATAACACCCTGATA < 2:165045/101‑1 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATAC < 2:802016/101‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCA > 1:1192609/1‑101 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAG > 2:731259/1‑101 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGT < 2:1532064/101‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATA < 1:1119019/101‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAAC < 1:288044/101‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAAC < 1:979196/101‑1 TCATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGG > 1:640350/1‑101 ATCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCG < 2:1569294/101‑1 ATCGTCCAACAAAATAGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGGTGCGCGATAAACCACTGATACTCAGAGACAACGGCa > 2:1231757/1‑100 TCGTCCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGG < 1:351952/101‑1 CCAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGA < 1:1387138/101‑1 CAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAA > 1:997849/1‑101 CAACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAA > 1:490124/1‑101 AACAAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAG < 2:144094/101‑1 AAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCT > 2:209877/1‑101 AAAATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCT < 2:1192604/101‑1 ATGGGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTA < 2:640345/101‑1 GGTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTT > 2:1378256/1‑101 GTGCAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTT < 1:537189/101‑1 CAGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAG < 1:327075/101‑1 AGTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGC < 1:808384/101‑1 GTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACTCCCGGTTACTCAGAGTTAACGGCGGCAGAAGCCTGTATTTTGAGCA < 2:931992/101‑1 GTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCA < 2:490119/101‑1 GTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCA > 1:395678/1‑101 GTACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCA > 2:110352/1‑101 TACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCAC < 2:697967/101‑1 TACAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCAC < 1:251750/101‑1 CAGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCT < 2:212619/101‑1 AGCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTG > 1:734771/1‑101 | AGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/99‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTG > 62/21548‑21646 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |