| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 222 | 1 = | 0 (0.000) | 78 (0.050) | 60/200 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 61 | = 24668 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/99‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCA < 61/24668‑24569 AGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGT > 2:171002/1‑101AGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGT > 2:583860/1‑101 GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTa < 1:163869/101‑2 TTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGC < 1:511106/101‑1 CACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGT > 1:123446/1‑101 GACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAG > 2:631330/1‑101 GACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAG < 2:864688/101‑1 GACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAG < 2:1477458/101‑1 GACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAG < 1:826589/101‑1 CTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGAT > 2:1254404/1‑101 TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATT < 2:1298690/101‑1 TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATT > 2:1631908/1‑101 TCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTT < 1:1517692/101‑1 TCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTT < 2:331726/101‑1 AAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTCTGGCGTTAGATTTCG > 1:585342/1‑101 AGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGA > 1:693104/1‑101 GGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGAC < 2:932040/101‑1 GGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGAC < 1:175558/101‑1 GCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTG < 2:686427/101‑1 GCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTG < 2:611342/101‑1 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGA > 1:410154/1‑101 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGT < 1:344199/101‑1 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGT > 1:430587/1‑101 TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTA < 2:76320/101‑1 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTAC > 2:673634/1‑101 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTAC < 2:502227/101‑1 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACC < 1:323808/101‑1 aacGGGTATTTTGGGTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCA < 2:495319/98‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAG < 1:139289/101‑1 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTT < 1:1459673/101‑1 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTT > 2:1436491/1‑101 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTT > 2:604499/1‑101 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCG > 1:93045/1‑101 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCG < 1:77300/101‑1 tTTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGAT < 2:1298445/100‑1 ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGAT < 2:248899/101‑1 ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGAT > 1:540252/1‑101 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGCTA > 1:710224/1‑101 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATA > 1:343651/1‑101 TTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAA < 1:1467984/101‑1 TGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGCACCCAGTTCGATAACC > 2:216436/1‑101 GCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCT < 1:684766/101‑1 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGTCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGT > 1:547065/1‑101 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGT > 1:424263/1‑101 TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTT > 1:1347596/1‑101 TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTT < 1:183581/101‑1 TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGGACCCAGTTCGATAACCCTGTT > 2:555300/1‑101 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTT < 1:1152054/101‑1 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTT < 2:1582682/101‑1 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCG > 2:45024/1‑101 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGG > 2:1136179/1‑101 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGG > 2:528736/1‑101 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATT > 1:1229973/1‑101 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAAT > 1:1664288/1‑101 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAAT < 2:234589/101‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAAT > 2:754360/1‑101 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTG < 1:174370/101‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATC < 1:1539348/101‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATC < 2:710219/101‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCT > 1:96828/1‑101 ATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCT > 1:297555/1‑101 ATTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCT < 1:178824/101‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTG > 1:1642454/1‑101 TCATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGT > 1:1480271/1‑101 ATCGTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGC > 2:1251219/1‑101 GTCCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACG > 2:64831/1‑101 CCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCA > 2:955274/1‑101 CCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCA < 2:1705214/101‑1 CCAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCA > 2:1390082/1‑101 CAACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAG < 2:1439284/101‑1 ACAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCG < 2:1213234/101‑1 CAAAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGC > 2:106122/1‑101 AAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGCAT < 1:614612/101‑1 AAATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGCAT < 1:1254409/101‑1 ATGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTA > 1:871803/1‑101 TGGGTGCAGTACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTAC < 2:722622/101‑1 TACAGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCA < 1:1632056/101‑1 AGTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCA < 1:1436497/101‑1 AGTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/99‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCTGGCGTTAGATTTCGACCTGAGTACCCAGTTCGATAACCCTGTTTGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCA < 61/24668‑24569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |