New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 215 1 =0 (0.000)42 (0.880) 25/158 1.4 53.5% intergenic (–/–) –/– –/–
?91 = 8391 73 (1.510)intergenic (–/–) –/– –/–

ATTGATGAATCGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  215/120‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgaacgccttatccggcctaCAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCG  <  91/8391‑8292
                                                                                                                                                                                                                            
ATTGATGAATCGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGT                                                                                                                         >  1:1479638/1‑101
  TGATGAATCGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGA                                                                                                                       >  1:786725/1‑101
  TGATGAATCGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGA                                                                                                                       <  1:619710/101‑1
      GAATCGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGC                                                                                                                   <  2:342207/101‑1
        ATCGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCT                                                                                                                 <  2:1282454/101‑1
          CGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTA                                                                                                               >  2:1416409/1‑101
          CGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTA                                                                                                               >  1:265667/1‑101
          CGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTA                                                                                                               <  1:237908/101‑1
            ATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATC                                                                                                             >  1:1032844/1‑101
              AATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG                                                                                                           >  2:504116/1‑101
               ATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGG                                                                                                          <  2:1256541/101‑1
               ATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGG                                                                                                          <  2:86687/101‑1
               ATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGG                                                                                                          <  1:1231530/101‑1
                 TTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCC                                                                                                        <  1:1472105/101‑1
                    TAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC                                                                                                     <  2:1630900/101‑1
                     AGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACA                                                                                                    >  1:1244507/1‑101
                        GGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAA                                                                                                 <  2:938184/101‑1
                         GGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAG                                                                                                <  2:658164/101‑1
                          GTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGC                                                                                               <  1:77266/101‑1
                           TTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCA                                                                                              >  1:1566863/1‑101
                           TTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCA                                                                                              >  2:288619/1‑101
                             TTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAtg                                                                                            <  1:1634507/101‑3
                              TATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAtga                                                                                           <  1:828123/101‑4
                              TATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAtga                                                                                           >  1:254506/1‑98
                               ATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAtgaa                                                                                          >  2:1667763/1‑97
                               ATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAtgaa                                                                                          >  1:479450/1‑97
                                  GAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAAT                                                                                       <  2:829598/101‑1
                                    ATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTC                                                                                     <  2:290628/101‑1
                                     TGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCA                                                                                    <  2:833004/101‑1
                                      GGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAA                                                                                   >  2:809266/1‑101
                                       GTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAAT                                                                                  >  1:1086086/1‑101
                                       GTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAAT                                                                                  >  1:130492/1‑101
                                        TTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTCCAAAAGCATGAAAATTCAATA                                                                                 <  2:48951/101‑1
                                          ATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATA                                                                               >  1:529266/1‑101
                                          ATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATA                                                                               <  1:354928/101‑1
                                            ATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGGTCATGCCGGATGCGGCGTGAACGGCTTATCCGGCCTACAAAAGCAAGAAAATTCAATATATT                                                                             >  1:1055525/1‑101
                                                TACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAG                                                                         <  2:1418414/101‑1
                                                TACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAG                                                                         <  2:1161285/101‑1
                                                TACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAG                                                                         <  2:1160689/101‑1
                                                TACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAG                                                                         <  1:1400145/101‑1
                                                 ACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGg                                                                        <  2:1282222/101‑2
                                                  CGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGga                                                                       <  2:1630622/101‑3
                                                      GGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGgagctg                                                                   >  1:687526/1‑95
                                                          AAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGgagctgcgta                                                               >  1:1180415/1‑91
                                                                CTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTG                                                         <  2:1361948/101‑1
                                                                CTGACAAAGTGCAATTTGTTCATGCCGGATGCCGCCTGAACGCCTTATCCGTCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTG                                                         <  1:1192587/101‑1
                                                                 TGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGA                                                        >  2:251978/1‑101
                                                                 TGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGA                                                        >  2:1340633/1‑101
                                                                        GTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGGCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGT                                                 >  2:298880/1‑101
                                                                        GTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGT                                                 >  2:1095451/1‑101
                                                                         TGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTA                                                >  2:205908/1‑101
                                                                          GCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAG                                               >  2:408729/1‑101
                                                                           CAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGC                                              >  1:712790/1‑101
                                                                             ATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGC                                            >  2:872168/1‑101
                                                                             ATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGC                                            >  2:597074/1‑101
                                                                             ATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGC                                            >  2:795194/1‑101
                                                                                                                      TACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCC   <  2:265667/101‑1
                                                                                                                      TACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCC   <  1:159102/101‑1
                                                                                                                      TACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCC   >  1:1622345/1‑101
                                                                                                                       ACAAAAGCATGAAAATTCAATATATTGCAGGAGCTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCG  <  2:712785/101‑1
                                                                                                                                                                                                                            
ATTGATGAATCGATAATTTTTAGCGGGTTTTATTGAATGGTTATATTTTACGGGGGCCAAATTGCTGACAAAGTGCAATTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  215/120‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgaacgccttatccggcctaCAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTGGCGTTTGTCATCAGAGCCAACCACGTCCG  <  91/8391‑8292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.