New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 210 | 2891 = | NA (NA) | 45 (1.120) +ATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCT |
30/126 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
? | 58 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 210/2923‑2891 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGC > 58/1‑100 ||||||||||||||||||||||||||||||||||||| actgtAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAAC < 2:995654/96‑1 acgtAGGCCTGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACG < 1:231368/97‑1 tgtAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGg > 1:759105/4‑100 tcGGCCGAATACGGCGTTCTCGCCTCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAG < 1:1359849/99‑1 tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAG < 2:942033/100‑1 AGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGG > 1:849417/1‑101 AGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGG < 1:1543094/101‑1 AGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGG < 2:37488/101‑1 GCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCC < 1:1139016/101‑1 CCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCG < 1:1422826/101‑1 CCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCG < 2:1541164/101‑1 GGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGA > 2:1255458/1‑101 GGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGA > 2:480510/1‑101 GGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGA > 1:37488/1‑101 GGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGA > 1:872558/1‑101 GATACGGCGTTCACGACGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGAT < 1:1078019/101‑1 GATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGAT > 2:228284/1‑101 ATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATA > 2:855521/1‑101 AAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAG > 2:1139011/1‑101 AGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGG < 2:512133/101‑1 GGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGC > 1:20498/1‑101 CGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCAT < 2:1425294/101‑1 GTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATT > 2:944057/1‑101 GTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATT > 1:636060/1‑101 TTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTT < 2:961784/101‑1 TTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTT > 2:1610413/1‑101 TTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTT < 2:391539/101‑1 TCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTA < 1:494220/101‑1 CGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGC < 1:667630/101‑1 GCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCC > 2:1502140/1‑101 GCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCC < 1:1094064/101‑1 CCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCG > 2:969768/1‑101 CCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCG > 1:224408/1‑101 CGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGC > 1:771757/1‑101 ATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATC < 1:825841/101‑1 ATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATC < 2:178788/101‑1 TCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCC < 1:1147743/101‑1 TCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCC < 1:1368599/101‑1 GGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGC < 2:1205181/101‑1 GCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA > 1:1112866/1‑101 CAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAA > 1:820118/1‑101 AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAAT > 1:189620/1‑101 AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAAT > 2:1533539/1‑101 AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAAT > 1:1092200/1‑101 AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAAT > 2:989072/1‑101 ATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATT > 1:718556/1‑101 CGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCT < 2:1112861/101‑1 CGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCT > 2:748632/1‑101 GGTGCTCGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTC < 2:681637/101‑1 GGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTC < 2:1585821/101‑1 GTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCT > 1:879788/1‑101 GCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGC < 2:117754/101‑1 GCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGC > 2:356189/1‑101 GATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCT < 2:153191/101‑1 ATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTG > 1:1624655/1‑101 ATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTG > 2:105609/1‑101 ATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTG > 2:93030/1‑101 GCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGAT < 1:1610419/101‑1 CCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATG > 1:1568898/1‑101 CCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATG < 1:1582653/101‑1 GATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGG < 2:347123/101‑1 ATGCGACGCTTGCGCGTCTTATCATCCCTAAACCCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGG < 2:874837/101‑1 TGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGC < 1:1016371/101‑1 TGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGC < 1:1390618/101‑1 CGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGC < 1:1550880/101‑1 CTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAAT > 2:1053274/1‑101 CTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAAT < 2:820113/101‑1 TTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATG > 1:134204/1‑101 GTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGT > 2:1170860/1‑101 GTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGT > 1:169858/1‑101 GTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGT > 2:1387675/1‑101 TCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTG < 1:228284/101‑1 TTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGC > 2:1465113/1‑101 ||||||||||||||||||||||||||||||||||||| ‑‑‑‑‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 210/2923‑2891 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGC > 58/1‑100 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |