New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	198	1 =	0 (0.000)	32 (0.660) +GGCCTACGTTCAGCACGTTACTCC	20/152	2.1	54.3%	intergenic (–/–)	–/–	–/–
	?	6	35383 =	71 (1.130)					intergenic (–/–)	–/–	–/–

GACGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  198/97‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCCGGATAAGACGTGGCAAGCGTCGCATCCGGCAATGTGCTTCAACT  >  6/35383‑35431                                                                                                  ||||||||||||||||||||||||                                                  GACGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCC                                                                       >  1:123884/1‑101   CGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTA                                                                     >  2:470164/1‑101      ATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGT                                                                  >  2:1280295/1‑101      ATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGT                                                                  <  1:1608552/101‑1      ATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGGAAACGCCTTAACCGGCCTACGT                                                                  >  2:382124/1‑101      ATAATAAATATGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGAAAGATTGGGAGTTACCTGCCGGATGAGGCGTAAACGCCTTATCCAGCCTACGT                                                                  >  2:91340/1‑101       TAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTT                                                                 >  1:1706719/1‑101         ATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCA                                                               <  1:1382488/101‑1          TAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAG                                                              <  2:605703/101‑1           AAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGC                                                             >  2:1597567/1‑101           AAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGC                                                             >  2:135978/1‑101            AATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCA                                                            >  1:1057911/1‑101               TTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGT                                                         >  1:174996/1‑101                TGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTT                                                        >  2:588410/1‑101                 GTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTA                                                       >  2:167743/1‑101                  gGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTAC                                                      <  2:349665/100‑1                  TGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTAC                                                      <  2:1660824/101‑1                   GGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGGCGAAACGACTTATTCGGCCTACGTTCAGCACCTTACT                                                     >  1:1534794/1‑101                   GGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACT                                                     <  1:30349/101‑1                    GTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTC                                                    >  2:324704/1‑101                    GTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTC                                                    <  1:1488544/101‑1                       CTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAG                                                 >  2:1068809/1‑101                       CTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCCGCCTACGTTCAGCACGTTACTCCAG                                                 >  2:813976/1‑101                       CTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCCGATGGCGCGTAAACCCCTTATCCGGCCTACGTTCAGCACGTTACTCCAG                                                 >  2:1500301/1‑101                        TGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGG                                                <  2:300915/101‑1                        TGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGG                                                >  2:895115/1‑101                         GAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGC                                               >  2:816276/1‑101                                 TGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAG                                       >  1:1270220/1‑101                                  GAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGA                                      <  1:357251/101‑1                                             GTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCG                           >  2:337664/1‑101                                             GTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCG                           >  2:1683762/1‑101                                               CGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTC                         <  2:486249/101‑1                                                  CGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCA                      >  2:847520/1‑101                                                   GGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCAT                     >  2:489553/1‑101                                                    GTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATC                    >  2:1056266/1‑101                                                     TAAGATTGGGAGTTACCTGCCGGATGCGGCTTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCC                   <  1:816281/101‑1                                                     TAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCC                   <  2:130000/101‑1                                                      AAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCG                  >  2:98873/1‑101                                                       AGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGG                 >  1:343314/1‑101                                                       AGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGG                 >  1:1543346/1‑101                                                        GATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGC                <  2:1238736/101‑1                                                         ATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCA               >  2:792767/1‑101                                                           TGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAAT             >  1:1119109/1‑101                                                              GAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTc          <  2:1221660/101‑2                                                               AGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTct         <  2:527573/101‑3                                                               AGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTct         >  2:1376134/1‑99                                                                GTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTCCGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGCCGCATCCGGCAATGTctg        >  2:1661600/1‑98                                                                GTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctg        <  1:1698565/101‑4                                                                GTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctg        >  1:1179738/1‑98                                                                  TACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctgcc      >  1:1648125/1‑96                                                                   ACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctgccc     >  1:404524/1‑95                                                                    CCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctgccca    <  1:1569387/101‑8                                                                      TGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctgcccagt  <  2:1176545/101‑10                                                                                                  ||||||||||||||||||||||||                                                  GACGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  198/97‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCCGGATAAGACGTGGCAAGCGTCGCATCCGGCAATGTGCTTCAACT  >  6/35383‑35431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.