New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	196	= 5276	0 (0.000)	47 (0.850)	41/198	0.3	100%	intergenic (–/–)	–/–	–/–
	?	74	2 =	0 (0.000)					intergenic (–/–)	–/–	–/–

GTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  196/5178‑5276 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTGGCACCGGCTGCCG  >  74/2‑99                                                                                                                                                                                                       GTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTA                                                                                                  >  1:702348/1‑101  TAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTAT                                                                                                 <  2:256413/101‑1  TAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTAT                                                                                                 <  1:610375/101‑1    AACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCC                                                                                               <  2:352614/101‑1         CTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCT                                                                                          <  2:253152/101‑1          TGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTA                                                                                         <  1:1490150/101‑1          TGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTA                                                                                         <  2:1570229/101‑1            ATCCGTCCAACGGTTCGGATTTTGTAGGCCTGTTAAGACGCGGTAGCGGCGCATCAGGCGTCTGTTGGCGGATGCGGCGTAAACCCCTTCTCCGTCCTAag                                                                                       >  1:5474/1‑99            ATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACG                                                                                       <  2:452600/101‑1                 TCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTA                                                                                  <  2:898383/101‑1                  CCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCTCATCAGGCATCTGTTGCCGCGTGCGGCGTAAACGCTTTATCCGTTCTACGAATTAC                                                                                 <  2:838645/101‑1                     ACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCCCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTA                                                                              <  1:1649659/101‑1                        GTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAA                                                                           <  1:1526331/101‑1                           CGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCAGGATGCGGCGTAAACGCCTTATCCGTCCTACCAATTACTTATAAATT                                                                        <  2:263644/101‑1                             GATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTAC                                                                      <  2:550102/101‑1                              ATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACC                                                                     <  1:1018177/101‑1                              ATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACC                                                                     >  1:1372755/1‑101                              ATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACC                                                                     >  2:1220986/1‑101                                TTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGC                                                                   <  1:379467/101‑1                                  TGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAG                                                                 <  1:747109/101‑1                                   GTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGT                                                                >  1:124782/1‑101                                   GTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGT                                                                >  2:486260/1‑101                                      GGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACC                                                             <  1:1608681/101‑1                                       GCCTGATAAGGCGCGGTAGCGTCGCATCAGTCATCGGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTCCGAATTACTTATAAATGACCGCAGTACCG                                                            <  2:406073/101‑1                                          TGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTT                                                         >  1:743143/1‑101                                           GATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTA                                                        >  2:887079/1‑101                                            ATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAA                                                       >  2:395481/1‑101                                            ATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAA                                                       <  1:631117/101‑1                                                 ACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTAT                                                  <  1:1464988/101‑1                                                  CGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATT                                                 <  2:1498602/101‑1                                                   GCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTG                                                <  1:1369851/101‑1                                                     GGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTT                                              <  1:1350001/101‑1                                                     GGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTT                                              <  2:82774/101‑1                                                           GTCGCATCAGGCATCTGTTGGCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGT                                        >  2:1058531/1‑101                                                              GCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGC                                     >  1:218980/1‑101                                                               CATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCG                                    >  2:601627/1‑101                                                                         CTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGC                          >  1:1136374/1‑101                                                                              GCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTAT                     >  2:673670/1‑101                                                                               CCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATC                    >  1:716249/1‑101                                                                                    TGCGGCGTAAACGCCTTATCCGGCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTG               >  1:168420/1‑101                                                                                      CGGCGTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTGGC             >  2:694319/1‑101                                                                                          GTAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTGGCACCG         >  2:881911/1‑101                                                                                           TAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTGGCACCGG        >  1:664988/1‑101                                                                                           TAAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTGGCACCGG        >  2:1055219/1‑101                                                                                            AAACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTGGCACCGGC       >  1:1047762/1‑101                                                                                             AACGCCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTGGCACCGGCT      >  2:1178109/1‑101                                                                                                 CCTTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTGGCACCGGCTGCCG  >  1:382855/1‑101                                                                                                                                                                                                       GTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  196/5178‑5276 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTATCCGTCCTACGAATTACTTATAAATTACCGCAGTACCGCTTAATTTATTGTTGTTGGTGGCGGAAGTGATGCTGTATCCACTGGCACCGGCTGCCG  >  74/2‑99

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.