New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 187 = 53051 (0.010)63 (0.040) 52/200 0.2 99.2% intergenic (–/–) –/– –/–
?222 1 = 0 (0.000)intergenic (–/–) –/– –/–

GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  187/5206‑5305
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA  >  222/1‑97
                                                                                                                                                                                                     
GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGT                                                                                                  <  1:1549172/101‑1
GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGT                                                                                                  <  2:1086007/101‑1
 TGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTG                                                                                                 <  2:241050/101‑1
   CGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTA                                                                                               >  2:441986/1‑101
      CGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTG                                                                                            <  1:1525178/101‑1
       GTACACCACACAGATTCAATACGGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC                                                                                           >  2:149515/1‑101
       GTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC                                                                                           >  1:118657/1‑101
       GTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC                                                                                           >  1:162675/1‑101
       GTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC                                                                                           >  1:1266783/1‑101
             CACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCAT                                                                                     >  2:777952/1‑101
                  AGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGT                                                                                <  1:100815/101‑1
                  AGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGT                                                                                <  2:235092/101‑1
                   GATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTT                                                                               >  2:115050/1‑101
                   GATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTT                                                                               >  1:329078/1‑101
                   GATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTT                                                                               <  1:1459750/101‑1
                    ATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTG                                                                              >  2:75362/1‑101
                     TTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGG                                                                             <  1:134617/101‑1
                     TTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGG                                                                             <  1:1693833/101‑1
                      TCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGA                                                                            <  2:1201158/101‑1
                       CAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGAC                                                                           <  1:842233/101‑1
                        AATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACG                                                                          >  1:609262/1‑101
                            CCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGA                                                                      <  1:1613343/101‑1
                             CGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAA                                                                     <  1:755394/101‑1
                               CGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAAT                                                                   >  1:1511919/1‑101
                                 AGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGG                                                                 <  2:459597/101‑1
                                     CCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA                                                             <  2:1087174/101‑1
                                     CCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA                                                             <  1:743056/101‑1
                                         AATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGGCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC                                                         >  1:1328628/1‑101
                                          ATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGGCCC                                                        >  2:508246/1‑101
                                            TGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA                                                      <  1:1498444/101‑1
                                                ACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                                                  <  1:794869/101‑1
                                                ACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                                                  >  1:953173/1‑101
                                                   GCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTC                                               >  1:901431/1‑101
                                                    CCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTCCTGCACCCATTTTGTTGGACGATTAAATGGAATAGCCCCTAATATGTCA                                              <  2:941921/101‑1
                                                    CCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCA                                              <  1:1134760/101‑1
                                                     CGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA                                             <  1:1071344/101‑1
                                                     CGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA                                             >  1:693827/1‑101
                                                      GCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAA                                            <  2:1677130/101‑1
                                                           GCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAA                                       <  2:1070101/101‑1
                                                           GCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAA                                       >  2:900321/1‑101
                                                              AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT                                    <  1:777957/101‑1
                                                              AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT                                    >  1:1288780/1‑101
                                                                GAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAC                                  <  1:212812/101‑1
                                                                 AGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACC                                 >  2:1442967/1‑101
                                                                    GGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTT                              <  2:610875/101‑1
                                                                     GCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT                             <  2:1226944/101‑1
                                                                     GCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT                             >  1:1473044/1‑101
                                                                       CATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG                           >  1:81202/1‑101
                                                                        ATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA                          >  1:299299/1‑101
                                                                           GATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA                       >  1:1233818/1‑101
                                                                            ATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG                      <  1:1507034/101‑1
                                                                             TAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGC                     >  1:68445/1‑101
                                                                               AGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGC                   <  1:75362/101‑1
                                                                                 TCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCT                 <  2:901426/101‑1
                                                                                      AGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAG            <  1:909551/101‑1
                                                                                          TAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGT        >  2:1583413/1‑101
                                                                                           AGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTG       >  2:653749/1‑101
                                                                                            GAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGA      <  2:1266778/101‑1
                                                                                            GAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGA      >  1:733313/1‑101
                                                                                            GAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGA      >  1:1594491/1‑101
                                                                                             AACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA     >  1:1192606/1‑101
                                                                                                AATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA  <  2:118657/101‑1
                                                                                                AATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA  <  2:1374615/101‑1
                                                                                                                                                                                                     
GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  187/5206‑5305
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA  >  222/1‑97

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.