New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 187 | = 5305 | 1 (0.010) | 63 (0.040) | 52/200 | 0.2 | 99.2% | intergenic (–/–) | –/– | –/– |
? | 222 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 187/5206‑5305 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA > 222/1‑97 GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGT < 1:1549172/101‑1 GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGT < 2:1086007/101‑1 TGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTG < 2:241050/101‑1 CGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTA > 2:441986/1‑101 CGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTG < 1:1525178/101‑1 GTACACCACACAGATTCAATACGGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC > 2:149515/1‑101 GTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC > 1:118657/1‑101 GTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC > 1:162675/1‑101 GTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC > 1:1266783/1‑101 CACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCAT > 2:777952/1‑101 AGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGT < 1:100815/101‑1 AGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGT < 2:235092/101‑1 GATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTT > 2:115050/1‑101 GATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTT > 1:329078/1‑101 GATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTT < 1:1459750/101‑1 ATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTG > 2:75362/1‑101 TTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGG < 1:134617/101‑1 TTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGG < 1:1693833/101‑1 TCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGA < 2:1201158/101‑1 CAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGAC < 1:842233/101‑1 AATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACG > 1:609262/1‑101 CCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGA < 1:1613343/101‑1 CGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:755394/101‑1 CGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:1511919/1‑101 AGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 2:459597/101‑1 CCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 2:1087174/101‑1 CCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:743056/101‑1 AATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGGCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:1328628/1‑101 ATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGGCCC > 2:508246/1‑101 TGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:1498444/101‑1 ACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT < 1:794869/101‑1 ACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > 1:953173/1‑101 GCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTC > 1:901431/1‑101 CCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTCCTGCACCCATTTTGTTGGACGATTAAATGGAATAGCCCCTAATATGTCA < 2:941921/101‑1 CCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCA < 1:1134760/101‑1 CGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA < 1:1071344/101‑1 CGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA > 1:693827/1‑101 GCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAA < 2:1677130/101‑1 GCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAA < 2:1070101/101‑1 GCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAA > 2:900321/1‑101 AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT < 1:777957/101‑1 AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT > 1:1288780/1‑101 GAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAC < 1:212812/101‑1 AGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACC > 2:1442967/1‑101 GGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTT < 2:610875/101‑1 GCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT < 2:1226944/101‑1 GCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT > 1:1473044/1‑101 CATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG > 1:81202/1‑101 ATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA > 1:299299/1‑101 GATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA > 1:1233818/1‑101 ATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG < 1:1507034/101‑1 TAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGC > 1:68445/1‑101 AGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGC < 1:75362/101‑1 TCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCT < 2:901426/101‑1 AGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAG < 1:909551/101‑1 TAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGT > 2:1583413/1‑101 AGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTG > 2:653749/1‑101 GAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGA < 2:1266778/101‑1 GAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGA > 1:733313/1‑101 GAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGA > 1:1594491/1‑101 AACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAA > 1:1192606/1‑101 AATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA < 2:118657/101‑1 AATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA < 2:1374615/101‑1 GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 187/5206‑5305 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA > 222/1‑97 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |