New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 182 1 =0 (0.000)61 (0.070)
+CCAACT
51/188 0.2 100% intergenic (–/–) –/– –/–
?223 = 698 0 (0.000)intergenic (–/–) –/– –/–

GTCGACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  182/96‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  <  223/698‑616
                                                                                                ||||||                                                                                   
GTCGACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAAC                                                                                      >  1:494828/1‑101
GTCGACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAAC                                                                                      <  2:251803/101‑1
  CGACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTT                                                                                    >  2:1096532/1‑101
   GACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATGCGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTA                                                                                   <  2:558819/101‑1
    ACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTAC                                                                                  >  2:875033/1‑101
    ACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTAC                                                                                  >  1:1423828/1‑101
     CGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACT                                                                                 >  1:1105223/1‑101
      GAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTG                                                                                >  2:865068/1‑101
       AGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGA                                                                               >  1:1057488/1‑101
         CAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATT                                                                             <  1:1086372/101‑1
         CAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATT                                                                             >  2:602208/1‑101
          AACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTT                                                                            <  2:1563779/101‑1
           ACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTA                                                                           <  2:420876/101‑1
           ACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTA                                                                           >  1:1350263/1‑101
           ACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTA                                                                           >  2:566893/1‑101
            CAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAG                                                                          <  2:466691/101‑1
              ACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTG                                                                        >  1:583925/1‑101
               CCGGATGCGGCGCTGGTGCAGCATGCGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGT                                                                       <  1:814355/101‑1
                CGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTA                                                                      >  1:349004/1‑101
                   ATGGGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                   <  2:184250/101‑1
                   ATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                   <  1:1653389/101‑1
                   ATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                   >  2:57449/1‑101
                    TGCGTCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT                                                                  <  1:1288818/101‑1
                    TGCGGCGCTGGGGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT                                                                  <  1:503775/101‑1
                     GCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                 <  2:1105218/101‑1
                        GCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG                                                              <  1:1105681/101‑1
                           CTGGTGCACCACCCGCTCCACCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                           <  1:534819/101‑1
                            TGGTGCAGCATACGCGCCATCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT                                                          <  1:201127/101‑1
                             GGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT                                                         <  1:566935/101‑1
                              GTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG                                                        <  2:1379443/101‑1
                                GCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                                      <  2:701177/101‑1
                                 CAGCATCCGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                     <  1:242243/101‑1
                                 CAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                     <  2:1718929/101‑1
                                        CGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA                                              <  1:831/101‑1
                                        CGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA                                              <  1:1598769/101‑1
                                         GCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG                                             <  1:875038/101‑1
                                         GCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG                                             <  1:1615084/101‑1
                                          CGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT                                            <  2:628121/101‑1
                                           GCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                           >  1:350389/1‑101
                                             CAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC                                         <  2:306362/101‑1
                                              AGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                                        <  2:1614236/101‑1
                                              AGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                                        >  1:410599/1‑101
                                                  GCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG                                    <  2:1435551/101‑1
                                                   CCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                                   >  2:1466963/1‑101
                                                       AGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                               <  2:1193679/101‑1
                                                        GGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTA                              <  1:1278152/101‑1
                                                         GACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                             <  2:1376250/101‑1
                                                         GACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                             <  2:1551431/101‑1
                                                           CAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                           <  1:1569927/101‑1
                                                            AGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG                          >  2:1160575/1‑101
                                                            AGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG                          >  1:1185446/1‑101
                                                               TACGTTCTGGCAGATGAGCTGGCGGCGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGCCTTATTGTTCTATCAGATG                       >  2:390683/1‑101
                                                               TACGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTG                       <  2:1179068/101‑1
                                                                 CGTGCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                     >  1:546799/1‑101
                                                                    GCTGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT                  >  2:919165/1‑101
                                                                      TGGCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC                >  2:796513/1‑101
                                                                        GCAGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTG              <  1:1096537/101‑1
                                                                          AGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT            >  2:983206/1‑101
                                                                          AGATGTGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT            >  2:407674/1‑101
                                                                               TGCTGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT       <  1:703920/101‑1
                                                                                 CTGGCGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAC     >  2:1427307/1‑101
                                                                                  TGGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT    >  2:1704921/1‑101
                                                                                    GCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  <  2:494823/101‑1
                                                                                                ||||||                                                                                   
GTCGACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCGGTGATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  182/96‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  <  223/698‑616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.