New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	177	= 7332	0 (0.000)	35 (0.060) +TATTGATAGTGTTTTATGTTCAGATAATGCCCGATGAC	26/124	0.4	100%	intergenic (–/–)	–/–	–/–
	?	223	1 =	0 (0.000)					intergenic (–/–)	–/–	–/–

ATATGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  177/7233‑7332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCG  >  223/1‑45                                                                                                     ||||||||||||||||||||||||||||||||||||||                                              ATATGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTT                                                                                    >  2:921443/1‑101  TATGTCAGCGTTTGTTGATTATAATATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTATCGCGGGGTAATGACTCCAACTTA                                                                                   <  2:551322/101‑1  TATGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTA                                                                                   <  1:1193374/101‑1   ATGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTAT                                                                                  >  1:1569485/1‑101   ATGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTAT                                                                                  <  2:200381/101‑1    TGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATT                                                                                 >  2:644626/1‑101    TGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATT                                                                                 <  1:153423/101‑1    TGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATT                                                                                 <  1:151406/101‑1      TCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGA                                                                               <  2:454437/101‑1       CAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGAT                                                                              >  1:247306/1‑101       CAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGAT                                                                              <  1:220491/101‑1           GTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTG                                                                          <  1:1347709/101‑1           GTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTG                                                                          >  1:818659/1‑101           GTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGACGCGGGGTAATGACTCCAACTTATTGATAGTG                                                                          >  1:550723/1‑101              TGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTT                                                                       >  2:1107902/1‑101              TGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTT                                                                       <  2:1303345/101‑1              TGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTT                                                                       >  2:1197564/1‑101                 TGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTAT                                                                    <  2:1443497/101‑1                 TGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTAT                                                                    <  2:1705424/101‑1                 TGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTAT                                                                    <  2:1107394/101‑1                 TGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTAT                                                                    >  1:793229/1‑101                 TGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTAT                                                                    >  2:1064520/1‑101                 TGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGGCGCGGTGTAATGACTCCAACTTATTGATAGTGTTTTAT                                                                    <  2:667929/101‑1                  GATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATG                                                                   <  1:769852/101‑1                       TAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAG                                                              <  1:14182/101‑1                        AAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGA                                                             >  1:779923/1‑101                         AAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAT                                                            <  2:847976/101‑1                          AATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATA                                                           <  2:242598/101‑1                            TCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAT                                                         <  2:1572942/101‑1                            TCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAT                                                         <  1:1690433/101‑1                            TCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAT                                                         <  1:731958/101‑1                              AACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGC                                                       >  1:549692/1‑101                                CCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC                                                     <  1:975208/101‑1                                CCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC                                                     <  1:66503/101‑1                                  AACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA                                                   >  2:1334963/1‑101                                    CTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATG                                                 <  1:1652111/101‑1                                       GATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACT                                              <  1:1058933/101‑1                                            CGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC                                         >  1:203774/1‑101                                            CGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC                                         <  2:296052/101‑1                                            CGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC                                         <  2:603251/101‑1                                             GATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCA                                        >  2:1355517/1‑101                                             GATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCA                                        <  1:1222490/101‑1                                             GATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCA                                        <  2:39726/101‑1                                              ATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTGAGATAATGCCCGATGACTTTGTCAT                                       >  1:22652/1‑101                                              ATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAT                                       >  1:1291619/1‑101                                              ATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAT                                       <  2:640200/101‑1                                              ATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACACCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAT                                       >  2:1312332/1‑101                                               TAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATG                                      >  2:977538/1‑101                                                AACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGC                                     <  2:528950/101‑1                                                 ACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCA                                    <  2:1180747/101‑1                                                   AAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGC                                  >  1:1593213/1‑101                                                      TTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCC                               <  2:793224/101‑1                                                      TTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCC                               <  2:164108/101‑1                                                        GAATGTTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAC                             <  2:484622/101‑1                                                           TATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGA                          >  1:387754/1‑101                                                              TAATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTT                       <  1:921448/101‑1                                                               AATAATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTT                      <  2:818654/101‑1                                                                  AATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAG                   >  2:1152266/1‑101                                                                  AATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAG                   >  1:1466718/1‑101                                                                  AATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAG                   >  2:1187730/1‑101                                                                   ATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGA                  >  2:865906/1‑101                                                                   ATGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGA                  >  2:1667021/1‑101                                                                    TGATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAA                 >  1:1268432/1‑101                                                                     GATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAC                >  1:1598097/1‑101                                                                     GATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAC                <  1:1692646/101‑1                                                                      ATGATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACG               >  2:1496968/1‑101                                                                         ATATTGTCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACA            >  1:1578647/1‑101                                                                               TCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACT      <  1:217347/101‑1                                                                               TCGCGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACT      <  1:676559/101‑1                                                                                  CGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCC   >  1:103498/1‑101                                                                                   GGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCG  >  1:1566313/1‑101                                                                                                     ||||||||||||||||||||||||||||||||||||||                                              ATATGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGGGTAATGACTCCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  177/7233‑7332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCG  >  223/1‑45

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.