New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 170 1 =0 (0.000)46 (0.980)
+TCCGCGCTGTCCATGTCCAGACTG
40/152 0.1 100% intergenic (–/–) –/– –/–
?194 1 = 0 (0.000)intergenic (–/–) –/– –/–

AAATAATGCTAACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  170/100‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGCTGGCAGGGCT  >  194/1‑99
                                                                                                    ||||||||||||||||||||||||                                                                                                   
AAATAATGCTAACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCT                                                                                                                            >  1:1130215/1‑101
  ATAATGCTAACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCC                                                                                                                          >  1:913199/1‑101
     ATGCTAACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCG                                                                                                                       >  1:585132/1‑101
      TGCTAACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGC                                                                                                                      >  1:42503/1‑101
        CTAACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTG                                                                                                                    >  1:249474/1‑101
         TAACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGT                                                                                                                   <  2:973977/101‑1
         TAACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGT                                                                                                                   >  1:1070303/1‑101
           ACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCC                                                                                                                 <  1:1110102/101‑1
                CTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTC                                                                                                            >  1:634570/1‑101
                 TATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCC                                                                                                           >  1:1189903/1‑101
                  ATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCA                                                                                                          >  2:121908/1‑101
                  ATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCA                                                                                                          >  1:884264/1‑101
                   TCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAG                                                                                                         >  1:875446/1‑101
                      TATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACT                                                                                                      >  2:125768/1‑101
                         CAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTC                                                                                                   <  1:466525/101‑1
                         CAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTC                                                                                                   >  2:702413/1‑101
                           GGCTATTTTATTTGTCACTTCGGCCCCGGGCAGTGCTCGAAATCTTCCCGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTG                                                                                                 <  2:165838/101‑1
                             CTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCA                                                                                               >  1:1024259/1‑101
                              TATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAA                                                                                              >  1:1450295/1‑101
                               ATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAAC                                                                                             <  1:464764/101‑1
                                TTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACA                                                                                            >  2:1235010/1‑101
                                  TTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAAT                                                                                          <  2:618214/101‑1
                                   TATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATT                                                                                         <  2:1130210/101‑1
                                    ATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTA                                                                                        <  2:1450289/101‑1
                                    ATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTA                                                                                        >  1:521595/1‑101
                                    ATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTA                                                                                        <  2:889651/101‑1
                                     TTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTAC                                                                                       <  1:508152/101‑1
                                      TTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACG                                                                                      <  2:8795/101‑1
                                           AGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCAC                                                                                 >  2:1554434/1‑101
                                           AGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCAC                                                                                 >  2:264635/1‑101
                                                 GCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGAT                                                                           <  1:1372284/101‑1
                                                   CCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAG                                                                         <  1:764546/101‑1
                                                   CCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAG                                                                         <  2:107645/101‑1
                                                     CGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGC                                                                       <  2:204432/101‑1
                                                       GGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTT                                                                     <  2:1474700/101‑1
                                                          AGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAA                                                                  >  1:843127/1‑101
                                                          AGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAA                                                                  <  1:219572/101‑1
                                                           GTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAG                                                                 <  2:1312020/101‑1
                                                            TGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGT                                                                >  1:1641248/1‑101
                                                            TGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGT                                                                <  2:873597/101‑1
                                                              CTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCT                                                              >  1:886244/1‑101
                                                                   AATCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCNNCAATTACGCCCACNNNNNNNNNCTTTAAGTCTGGTGA                                                         >  2:580667/1‑101
                                                                     TCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAAT                                                       <  1:768419/101‑1
                                                                     TCTTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAAT                                                       <  2:634565/101‑1
                                                                       TTCACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATAT                                                     >  2:438435/1‑101
                                                                         CACGTACGATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGC                                                   <  1:1235015/101‑1
                                                                                 ATATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATT                                           >  1:1316273/1‑101
                                                                                   ATGTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTT                                         >  2:92257/1‑101
                                                                                     GTACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTC                                       >  2:1487716/1‑101
                                                                                      TACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCA                                      <  1:104758/101‑1
                                                                                      TACGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCA                                      <  2:1004710/101‑1
                                                                                        CGCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAAC                                    >  2:1122969/1‑101
                                                                                         GCTCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACG                                   <  2:585127/101‑1
                                                                                           TCCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGAT                                 <  2:895613/101‑1
                                                                                            CCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATT                                <  2:739622/101‑1
                                                                                            CCGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATT                                <  1:69780/101‑1
                                                                                             CGGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTA                               <  2:913194/101‑1
                                                                                              GGTTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGGGAATATGCGACACATTTTTCAACGATTAT                              >  1:1326614/1‑101
                                                                                                TTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTG                            >  2:382353/1‑101
                                                                                                TTTCTCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTG                            <  2:521590/101‑1
                                                                                                    TCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCC                        >  1:1286242/1‑101
                                                                                                    TCCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCC                        <  1:1335697/101‑1
                                                                                                     CCGCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCG                       >  2:656113/1‑101
                                                                                                       GCGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGAC                     <  2:1189898/101‑1
                                                                                                        CGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACG                    >  2:966588/1‑101
                                                                                                        CGCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACG                    <  1:121908/101‑1
                                                                                                         GCTGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGCCGG                   >  2:655707/1‑101
                                                                                                           TGTCCATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACGGCT                 >  1:1494728/1‑101
                                                                                                               CATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGG             <  1:264635/101‑1
                                                                                                                ATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGC            >  1:1127126/1‑101
                                                                                                                ATGTCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGC            >  1:1205842/1‑101
                                                                                                                   TCCAGACTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGCTGG         <  1:1059124/101‑1
                                                                                                                         CTGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGCTGGCACGGC   >  2:1174780/1‑101
                                                                                                                          TGTCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTNNNNNNTATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGCTGGCAGGGCT  <  1:580672/101‑1
                                                                                                    ||||||||||||||||||||||||                                                                                                   
AAATAATGCTAACAGCCTATCCTATCAGGCTATTTTATTTGTCAGTTCGGCCCCGGGCAGTGCTCGAAATCTTCACGTACGATATGTACGCTCCGGTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  170/100‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTGCAACAATTACGCCCACTGGGATAGGCTTTAAGTCTGGTGAATATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGCTGGCAGGGCT  >  194/1‑99

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.