| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 17 | 18481 = | 2 (0.030) | 80 (0.050) | 64/198 | 0.1 | 98.8% | intergenic (–/–) | –/– | –/– |
| ? | 222 | = 1442 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TCCATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 17/18581‑18481‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCT < 222/1442‑1346 TCCATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGT < 2:1024109/101‑1TCCATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGT < 1:1572110/101‑1TCCATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGT > 2:1690666/1‑101 CATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGT > 1:818274/1‑101 ATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTA > 1:724708/1‑101 ATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTA > 1:495366/1‑101 ATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTA < 1:1162178/101‑1 ATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTA > 2:1268962/1‑101 ATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTA < 1:1405935/101‑1 TTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTAC < 1:93004/101‑1 CGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCA > 2:456338/1‑101 GTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAA > 2:419448/1‑101 GTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAA > 1:502781/1‑101 TATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAA < 2:1548204/101‑1 TATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAA > 2:404028/1‑101 ATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAA > 2:592045/1‑101 ATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAA > 2:1011804/1‑101 CATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAG < 2:178082/101‑1 ATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGT > 1:1625133/1‑101 TTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTT > 1:519745/1‑101 ATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGG < 1:389130/101‑1 ATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGG > 1:1363263/1‑101 TGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGA < 1:1051835/101‑1 TTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACA > 2:1620293/1‑101 CTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGT > 2:1673202/1‑101 TACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTT > 2:1569998/1‑101 ACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTA > 1:929609/1‑101 GTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAA < 2:991024/101‑1 CTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 2:1073461/1‑101 CTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:350964/1‑101 CGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA > 1:102079/1‑101 CGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA < 2:519740/101‑1 GCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG < 2:99489/101‑1 GCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC > 2:232297/1‑101 GCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC < 2:412813/101‑1 CTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA < 1:1020958/101‑1 TGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT < 2:390833/101‑1 GATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATA < 2:818269/101‑1 ATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT > 2:1636751/1‑101 TGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 2:159134/101‑1 GTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG > 1:1137791/1‑101 ATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT > 1:353692/1‑101 ATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT > 2:1192787/1‑101 ATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT < 1:979259/101‑1 TTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG < 1:192984/101‑1 ATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAT > 1:1529420/1‑101 ATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAT > 2:1232591/1‑101 ATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAT < 1:1622416/101‑1 GTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGAT < 1:232297/101‑1 GTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAACTTGGACAGTTAAACACGAGGCATATAGGCCTGATTCCGAT > 1:391351/1‑101 TGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATA < 1:1027837/101‑1 TGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATA < 2:510212/101‑1 TGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATA < 1:692073/101‑1 GACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT > 2:1506081/1‑101 GCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGCCCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCA < 1:1378787/101‑1 GCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCA < 2:422075/101‑1 GCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCA < 1:999557/101‑1 CGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT < 1:1508121/101‑1 CGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT > 2:1317986/1‑101 CGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT < 2:436775/101‑1 GTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATT < 2:1531825/101‑1 GTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATT > 1:863685/1‑101 GTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATT > 2:383907/1‑101 TGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTG > 2:480555/1‑101 AGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAG < 2:1363257/101‑1 GTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT > 2:1407092/1‑101 GTAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGAC < 1:654978/101‑1 TAGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACC > 1:1505110/1‑101 AGTCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCT > 1:101682/1‑101 TCCCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTT < 2:1341354/101‑1 CCGGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTA < 1:315850/101‑1 GGAGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAAT < 1:556706/101‑1 AGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTT > 1:1705702/1‑101 AGAAAAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTT > 2:1539926/1‑101 AAAGCCCGTTTTTGTACTGACACCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAG < 2:197949/101‑1 AAGCCCGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGG > 1:554875/1‑101 CGTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAT < 2:1340059/101‑1 GTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATT < 2:1137786/101‑1 GTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATT > 2:1288349/1‑101 GTTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATT > 2:358638/1‑101 TTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTC < 2:201384/101‑1 TTTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGCCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTC > 1:193169/1‑101 TTGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCT > 1:1127913/1‑101 TCCATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 17/18581‑18481‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCT < 222/1442‑1346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |